Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01675 ATGCTCTCTCTCTATATATTGGAGGGTCTCACCTGCACCGTTTCTCACACTCTACTACAAAATCAAATTACAATGGCACGCTCTTCTTCTTCATCATCAACCATTAATAATGTTGCATTAGTAGTGTTCCTGCTTCTTATTATTACAGGGACTTCTTCAGCTCACCAACTCTCTAAGAACTTCTATTCTAAGAAATGTCCAAAGGTTTTTGACATTGTCAAATCTGTTGTCAAATCTGCTATAGCCAAAGAACGTCGAATAGGAGCATCTATTGTTCGCCTCTTCTTCCATGACTGCTTTGTTGATGGTTGTGATGGATCATTACTACTTGATGACACTTCATCGTTCAGAGGAGAGAAAACTGCACGTCCCAACAACAATTCTCTGAGAGGTTTTGAAGTAATTGATGCTATCAAGTCTAAGGTGGAGGCAGCATGCCCTGGTGTGGTGTCATGTGCTGATATCTTGACCATTTCTTCTCGTGACTCTGTTCTCATTCTTGGAGGACCTTTTTGGAAGGTAAAAGTTGGAAGAAGGGATTCTAGGACAGCCAATTTCACTGCAGCTAACAATGGTGTGATTCCAGCTCCCACTTCTAACCTCAGCAACCTTATCTCAACGTTTCAAGCTCAAGGGCTTTCTGCCAAGGACATGGTTGCCTTATCTGGTACTATTTCTCTATCTCTTCGAGCTCACACAATAGGGAAAGCAAGGTGTACTACTTTCAGAGATCACATATACAATGACAGCAACATTGACAGATCATTTGCTAAGACTAGGCAGAGGAATTGTCCAAGGACTAGTGGCTCAGGAGACAACAATCTTGCAGTTCTAGACTTCAGAACTTCTACTCATTTTGACAATAATTACTATAAGAACCTCATCATCAAAAGGGGACTACTTCATTCTGATCAGCAGTTGTTCAATGGTGGATCTACTGATTCACTTGTTAGAACTTATAGCCAGAATAGTAAGGCCTTTGATTCTGACTTTGTTACTGCAATGATTAAGATGGGAAACATCAAACCCTTAACTGGGTCCAAAGGGGAGATTAGGAAGAACTGCAGGAGAGTGAATTAA 1080 0.4093 MLSLYILEGLTCTVSHTLLQNQITMARSSSSSSTINNVALVVFLLLIITGTSSAHQLSKNFYSKKCPKVFDIVKSVVKSAIAKERRIGASIVRLFFHDCFVDGCDGSLLLDDTSSFRGEKTARPNNNSLRGFEVIDAIKSKVEAACPGVVSCADILTISSRDSVLILGGPFWKVKVGRRDSRTANFTAANNGVIPAPTSNLSNLISTFQAQGLSAKDMVALSGTISLSLRAHTIGKARCTTFRDHIYNDSNIDRSFAKTRQRNCPRTSGSGDNNLAVLDFRTSTHFDNNYYKNLIIKRGLLHSDQQLFNGGSTDSLVRTYSQNSKAFDSDFVTAMIKMGNIKPLTGSKGEIRKNCRRVN. 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01675 359 FunFam Peroxidase 195 338 - -
Seca5g01675 359 PRINTS Haem peroxidase superfamily signature 150 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01675 359 PRINTS Haem peroxidase superfamily signature 279 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01675 359 PRINTS Haem peroxidase superfamily signature 224 239 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01675 359 PRINTS Haem peroxidase superfamily signature 168 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01675 359 PRINTS Haem peroxidase superfamily signature 88 102 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01675 359 ProSitePatterns Peroxidases active site signature. 88 99 IPR019794 GO:0004601
Seca5g01675 359 PANTHER PEROXIDASE 72-RELATED 54 358 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01675 359 CDD secretory_peroxidase 56 358 IPR033905 GO:0004601|GO:0042744
Seca5g01675 359 Gene3D Peroxidase, domain 2 195 338 - -
Seca5g01675 359 FunFam Peroxidase 60 208 - -
Seca5g01675 359 Pfam Peroxidase 73 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01675 359 PRINTS Plant peroxidase signature 149 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01675 359 PRINTS Plant peroxidase signature 293 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01675 359 PRINTS Plant peroxidase signature 333 346 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01675 359 PRINTS Plant peroxidase signature 130 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01675 359 PRINTS Plant peroxidase signature 168 183 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01675 359 PRINTS Plant peroxidase signature 66 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01675 359 PRINTS Plant peroxidase signature 277 292 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01675 359 PRINTS Plant peroxidase signature 90 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01675 359 PRINTS Plant peroxidase signature 216 228 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01675 359 SUPERFAMILY Heme-dependent peroxidases 56 359 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g01675 359 Gene3D - 60 359 - -
Seca5g01675 359 ProSiteProfiles Plant heme peroxidase family profile. 56 359 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01675 Seca-Chr5 50408801 50411668 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01675 56 359 Peroxidase AT5G05340 67.763 6.56e-151 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01675 K00430 - gmx:100813384 502.671