Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01670 ATGGCTTCTCATCTCCAATATTTACTTGTGCTTGCCATTGCCGCATTTGTAATAATCCCTTCCCATGCACAACTTACTCCTGATTTCTACGACAAAGTATGCCCTCAGGCATTGCCAATCATTAAGTCAATTGTTCAGCGTGCAATTTTCCGTGAGCGACGTTTGGGAGCATCTTTACTTCGCTTGCATTTCCATGATTGTTTTGTCAATGGCTGTGATGGATCAGTTTTGCTGGATGACACCCCAAACTTCATTGGCGAGAAAAGTGCCCTCCCAAATATTGGTTCAATTAGAGGTTTGGAAGTGGTTGATGAAATTAAAGCAGCGGTTGACAAAGCTTGCAAACGCCCTGTGGTCTCTTGTGCCGATATCTTAGCTGTAGCCGCCCGTGATTCTGTCTCCATTTTGGGAGGTCCACTCTATTGGTACAAAGTGTTATTAGGCAGAAGAGACGCAACAACTGCTAGCAAAGATGCTGCAAACTCCAATCTTCCACCCCCATTTTTCAGCTTCTCACAGCTTCTTTCCAACTTTCAGTCTCATGGTTTGGACCTTAAAGATCTCGTAGCTCTCTCAGGTGCCCACACCATTGGACTTGCACAATGCTCTACCTTTAGGAACAGGATCTACAATGACACCGACATAGACCCCAAATTTGCATCTTCTTTACAAGGGACGTGCCCTAAAAGTGGTGGAGATAGCAATTTGGCAGCATTGGATCGTGCCACTCCCACAAGATTTGACACTTCATATTACACCGCTTTGCTTAGTAAAAGGGGTCTTCTTCATTCTGATCAATAG 801 0.4457 MASHLQYLLVLAIAAFVIIPSHAQLTPDFYDKVCPQALPIIKSIVQRAIFRERRLGASLLRLHFHDCFVNGCDGSVLLDDTPNFIGEKSALPNIGSIRGLEVVDEIKAAVDKACKRPVVSCADILAVAARDSVSILGGPLYWYKVLLGRRDATTASKDAANSNLPPPFFSFSQLLSNFQSHGLDLKDLVALSGAHTIGLAQCSTFRNRIYNDTDIDPKFASSLQGTCPKSGGDSNLAALDRATPTRFDTSYYTALLSKRGLLHSDQ. 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01670 266 CDD secretory_peroxidase 24 266 IPR033905 GO:0004601|GO:0042744
Seca5g01670 266 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01670 266 PRINTS Plant peroxidase signature 254 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01670 266 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01670 266 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01670 266 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01670 266 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01670 266 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01670 266 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01670 266 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01670 266 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01670 266 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01670 266 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01670 266 Pfam Peroxidase 42 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01670 266 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Seca5g01670 266 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Seca5g01670 266 PANTHER PEROXIDASE 72-RELATED 22 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01670 266 Gene3D Peroxidase, domain 2 165 266 - -
Seca5g01670 266 ProSiteProfiles Plant heme peroxidase family profile. 24 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01670 266 FunFam Peroxidase 28 169 - -
Seca5g01670 266 SUPERFAMILY Heme-dependent peroxidases 24 266 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g01670 266 FunFam Peroxidase 165 266 - -
Seca5g01670 266 Gene3D - 28 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01670 Seca-Chr5 50359417 50361534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01670 22 266 Peroxidase AT5G05340 58.300 1.31e-99 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01670 K00430 - gmx:100816580 452.595