Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01668 ATGGCTTCTCATCATCTCCAATATTTCCTTGTGGTTTCCATGGTAGCACTTTTAACAATCCCTTCCGATGCAAAACTCACTCCTGATTTTTATGACAAAGTATGCCCTCAGGCATTGCCAATCATTAAGTCAATTGTTCAGCGTGCAATCTCCCGTGAGCGACGCATGGGAGCATCTTTACTCCGTTTGCATTTCCATGACTGTTTTGTCAATGGTTGTGATGCATCAGTTTTGCTGGATGAAGCCCCAAACTTCCTTAGCGAGAAGATTGCCTCCCCAAATATGGGTTCACTGAGAGGTTTTGAGGTGGTTGATGAGATTAAAGCAGCGGTCGACAAAGCTTGTAAACGCCCTGTTGTATCATGTGCTGATATCTTAGCCGTAGCCGCTCGTGATTCCATCTCCATTTTGGGAGGTCAACTCTATTGGTACAAAGTGTTATTAGGAAGAAGAGATGCAACAACTGCTAGCATGGATGCTGCAAACACCAATCTTCCACCCCCATTTTTCAGCTTCTCACAACTTCTTACTAATTTTCAATCTCATGGTTTGGACCTTAAAGACCTAGTGGCTCTCTCTGGTGCCCACACCATTGGACTTGCCCAGTGCTCTATCTTCAGGAATAGAATCTACAATGAAAGTAACATAGATCACAAGTTTGCATCTTCTTTGCAAAGGACATGCCCTCTGATTGGTGGAGATAGCAATTTGGCAGCAATGGATTCCACTCCCACAAGATTTGACACTTCATACTACAAGGGTTTGCTTCATAAAAAGGGCCTTTTTCATTCTGATCAAGAGCTCTTCAAAGGAGATGGTAGTGAAAGTGACAGATTGGTGAAGCTATACAGCAAGAGCTCATCTGCTTTTTCTAGAGATTTTAAAGCTTCCATGACCAAAATGGGTAACATGAAGCCTCTTACTGGGAAGCTTGGACAGATCAGAGTCAACTGCAGAAAAACAAACCAAATGGCTTCTCATCTTCAATATTTACTTGTGCTTGCAATGGTTGCAATTTTAACAATCCCTTCACATTCACATCTTACTCCTGATTATTACGAGAAAGTATGCCCTCAGGCATTGCCAATCATTAAGTCAGTTGTTCATCGTGCACTTATCCGTCAACCACGCATGGGAGCATCTTTACTTCGTCTGCACTTCCATGACTGTTTTGTCAATGGCTGTGATGGATCAGTTCTGCTGGATGACACCCCAAATTTCATCGGTGAGAAGAACTCCATCCCAAATATGGGTTCACTTCAAGGTTTTGAGGTCATTGATGAAATTAAAGCAGCAGTTGACAAAGCTTGCAAACGCCCTGACCCTGTGGTCTCATGTGCTGATATCTTAGCTGTAGCTGCTCGTGATTCTGTCTCCATTTTGGGAGGTCAACTCTATTGGTACAGAGTGTTACTAGGCAGAAGAGATGCAACAACAGCTAGCAGAGATGCTGCAAACACCAATCTTCCACCTCCATTTTTCAGCTTCTCACAGCTTCTTTCCAATTTTCAGTCTCATGGTTTGGACCTTAAAGATCTCGTAGCTCTCTCAGGTGCCCACACCATTGGATTTGCGGCGTGCTCTACCTTTAAGAACAGGATCTACAATGACACAAACATAGACCCCAAATTTGCATCTTCTTTACAGGGGACATGTCCTAAAATTGGTGGAGATAACAATGATGTAGCATTGGATAGTGCCTCTCCCACAAGATTTGACACTTCATACTACACTGCTTTGCTTAGTAAAAGGGGTCTTCTTCACTCTGATCAAGAGCTCTTCAAGGGTGATGGTAGTGAGAGTGACTCATTGGTGAAGCTCTATAGCAGGAACCCCTCTGCTTTTGCTAGAGATTTTAAAGCTTCCATGATTAAGATGGGTAACATGAAGCCTCTTATTGGGAATGCTGGGGAGGTCAGAATCAATTGTAGAAAAGTCAACTAA 1944 0.4306 MASHHLQYFLVVSMVALLTIPSDAKLTPDFYDKVCPQALPIIKSIVQRAISRERRMGASLLRLHFHDCFVNGCDASVLLDEAPNFLSEKIASPNMGSLRGFEVVDEIKAAVDKACKRPVVSCADILAVAARDSISILGGQLYWYKVLLGRRDATTASMDAANTNLPPPFFSFSQLLTNFQSHGLDLKDLVALSGAHTIGLAQCSIFRNRIYNESNIDHKFASSLQRTCPLIGGDSNLAAMDSTPTRFDTSYYKGLLHKKGLFHSDQELFKGDGSESDRLVKLYSKSSSAFSRDFKASMTKMGNMKPLTGKLGQIRVNCRKTNQMASHLQYLLVLAMVAILTIPSHSHLTPDYYEKVCPQALPIIKSVVHRALIRQPRMGASLLRLHFHDCFVNGCDGSVLLDDTPNFIGEKNSIPNMGSLQGFEVIDEIKAAVDKACKRPDPVVSCADILAVAARDSVSILGGQLYWYRVLLGRRDATTASRDAANTNLPPPFFSFSQLLSNFQSHGLDLKDLVALSGAHTIGFAACSTFKNRIYNDTNIDPKFASSLQGTCPKIGGDNNDVALDSASPTRFDTSYYTALLSKRGLLHSDQELFKGDGSESDSLVKLYSRNPSAFARDFKASMIKMGNMKPLIGNAGEVRINCRKVN. 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01668 647 FunFam Peroxidase 166 301 - -
Seca5g01668 647 Gene3D - 351 644 - -
Seca5g01668 647 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01668 647 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01668 647 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01668 647 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01668 647 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01668 647 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01668 647 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01668 647 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01668 647 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Seca5g01668 647 ProSiteProfiles Plant heme peroxidase family profile. 25 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01668 647 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Seca5g01668 647 SUPERFAMILY Heme-dependent peroxidases 26 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g01668 647 ProSitePatterns Peroxidases active site signature. 379 390 IPR019794 GO:0004601
Seca5g01668 647 PANTHER PEROXIDASE 72-RELATED 23 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g01668 647 Gene3D - 29 319 - -
Seca5g01668 647 Gene3D Peroxidase, domain 2 166 301 - -
Seca5g01668 647 Gene3D Peroxidase, domain 2 490 626 - -
Seca5g01668 647 ProSiteProfiles Plant heme peroxidase family profile. 347 647 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01668 647 FunFam Peroxidase 29 169 - -
Seca5g01668 647 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01668 647 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01668 647 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01668 647 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01668 647 ProSitePatterns Peroxidases proximal heme-ligand signature. 512 522 IPR019793 -
Seca5g01668 647 FunFam Peroxidase 351 493 - -
Seca5g01668 647 SUPERFAMILY Heme-dependent peroxidases 348 647 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g01668 647 CDD secretory_peroxidase 25 321 IPR033905 GO:0004601|GO:0042744
Seca5g01668 647 Pfam Peroxidase 365 610 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01668 647 Pfam Peroxidase 43 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g01668 647 FunFam Peroxidase 490 626 - -
Seca5g01668 647 CDD secretory_peroxidase 347 646 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01668 Seca-Chr5 50323493 50332165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01668 345 647 Peroxidase AT5G05340 53.770 9.11e-110 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01668 K00430 - vvi:100232945 620.542