Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01664 ATGTCTTCTAATGTTCTTCAATGGCTAAGCCTTGTAGGCATCATTTGGCTCCAAGCCATAAGTGGCACAAACACCAATTTCCCTGCTTACTCTTCCCAGTTGAAGCAGCTTCTTTCCATTTCCCAAGTGCAGCTCAATAATCTTGCTTTTGCCTCTGATGCAGGGAAACTTTTTGGCTGGTTTTCAGGCCTTGCTTCTGTCTACCTCCCCCTTTGGCTTGTCCTCATAATCGGTTCATTTCTTGGGTTAATCGGTTATGGTGTGCAATATCTCTTCATAACTAATCAAATTGCCTCTCTTTCCTATTGGCATGTCTTCTTACTAACTTTTCTAGCTGGCAATAGCATTTGTTGGATTAACACAGTTTGCTATGTTGTCACTATAAGGAACTTTGTATCTGATCGCCAAGTTGCTGTGGGAATAACAACCAGTTACCAAGGTTTAAGTGCAAAGATTTATACCAATATTGTTGATGCTGTTTCTCCTCACAAGAAAGCTAGAACCTTTCTCTTCCTGAACTCTCTCTTACCAGTGGTAGTTTGCCTAATAGCAACTCCTCTAGTAAGAGAAATTGAAGTCAAAAGTCCTAACCACATGAATGTTGGGTTTGCTGTGATGTTTGTTATTACAATTGCAACTGGAATATATGCTGTGATGAGCAGCTTGCAATTTGTCACAAGCAAAACATCCTCAATGGGTATCCTGATTGGTATTCTAGTGTCCCTTCTCTTGCCTCTGTTAGTTCCAGTTTCAGTGAAGATCAAGGAACTAGCAGGGTCATGGCATAAAAAGAGAGAGAGACTAAGAGTCTACCATTTTACTATGGAGGAGAATACTAATGAAGAGAGGGCAGAGAATGAGGTGAAAGAGGATGAAGATAGCATAGAAGTTCAAGAGGATGGTGCTATGGAAGAAATTGGAGTGAAGTTAATGCTAAGAAGAACAAATTTCTGGTTATATTTCTTTGTTTACTTTTTTGGTGCCACAATTGGTTTAGTATTTCTTAACAACTTGGGACAAATAGCTGAATCCAGGGGTTGCTCTGGTACTTCATCTTTGGTGTCTTTGTCTTCATCTTTTGGGTTCTTTGGTCGTCTCATTCCATCTCTTATGGACTACTTTTACAGGGGAAATGGTGCAATTTCAAGACCTGCTTCAATTGTGGCATTGATGGCTCCAACATCAGGTGCATTTTTCTTACTTCTTAACAAAACTGATTATGCCCTCTACATCAGCACTGTAGTGATTGGAGTGTGTACTGGAGCAATCAGTTCTACTGCTGTTTCCACAACAACTGAGCTATTTGGCACCAAGAATTTCTCTGTAAACCATAATGTGGTTGTGGCCAACATTCCAATGGGGTCCTTTCTGTTTGGCTACTCGGCTGCACTTATTTACCATAAGGAAGGGGGGCATGAACATGGGAAATGCATGGGCATGGAATGCTACAGAAACACTTTTATCATTTGGGGTTCCTTTTGTTTCCTTGGTACTTTCTTGGCTTTGATTCTGTATACAAGGACTAGAAAGTTTTACTCACTTAAACAATAG 1551 0.4036 MSSNVLQWLSLVGIIWLQAISGTNTNFPAYSSQLKQLLSISQVQLNNLAFASDAGKLFGWFSGLASVYLPLWLVLIIGSFLGLIGYGVQYLFITNQIASLSYWHVFLLTFLAGNSICWINTVCYVVTIRNFVSDRQVAVGITTSYQGLSAKIYTNIVDAVSPHKKARTFLFLNSLLPVVVCLIATPLVREIEVKSPNHMNVGFAVMFVITIATGIYAVMSSLQFVTSKTSSMGILIGILVSLLLPLLVPVSVKIKELAGSWHKKRERLRVYHFTMEENTNEERAENEVKEDEDSIEVQEDGAMEEIGVKLMLRRTNFWLYFFVYFFGATIGLVFLNNLGQIAESRGCSGTSSLVSLSSSFGFFGRLIPSLMDYFYRGNGAISRPASIVALMAPTSGAFFLLLNKTDYALYISTVVIGVCTGAISSTAVSTTTELFGTKNFSVNHNVVVANIPMGSFLFGYSAALIYHKEGGHEHGKCMGMECYRNTFIIWGSFCFLGTFLALILYTRTRKFYSLKQ. 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01664 516 CDD MFS_Mch1p_like 6 498 - -
Seca5g01664 516 SUPERFAMILY MFS general substrate transporter 8 510 IPR036259 -
Seca5g01664 516 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 513 - -
Seca5g01664 516 Pfam Nodulin-like 7 250 IPR010658 -
Seca5g01664 516 Gene3D MFS general substrate transporter like domains 199 509 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01664 Seca-Chr5 50291217 50292767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01664 1 515 Nodulin-like Gene Family AT2G30300 48.859 1.48e-150 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01664 - - gmx:100793370 787.334