Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01661 ATGGAGCGAGTGAGGCTTAAGTTAAAACATGAGCTAAAACAGGGTTTCAAGAATAAAATAGTGGACATAAGAGAAGAGATTCTACGAAAGAGACGACCTGGGAAGCTCCCCGGAGACACCACCTCCCTTTTGAAAGCTTGGTGA 144 0.4444 MERVRLKLKHELKQGFKNKIVDIREEILRKRRPGKLPGDTTSLLKAW. 48
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01661 47 Pfam ELK domain 8 28 IPR005539 GO:0003677
Seca5g01661 47 ProSiteProfiles ELK domain profile. 7 27 IPR005539 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01661 Seca-Chr5 50266686 50267146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01661 1 47 Homeobox Transcription Factor Family AT5G25220 87.234 5.65e-23 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01661 - - minc:123201154 90.5077