Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01655 ATGCCTTCTGCTGCTTTTCAATGGCTAAGCCTTGTAGGCATCATTTGGCTCCAAGCTATAAATGGGACAAACACCAATTTCCCTGCTTACTCTTCCCAGTTGAAGCAGCTTCTTTCCATTTCCCAAGTTGAGCTCAATAACCTTGCTTTTGCCTCTGATGCAGGGAAACTTTTTGGCTGGTTTTCAGGCCTTGCTTCTGTCTACCTCCCCCTTTGGCTTGTCCTCATAATCGGTTCATTTCTTGGGTTAATCGGTTATGGTGTGCAATATCTCTTCATAACTAATCAAATTGCCTCTCTTTCCTATTGGCATGTCTTCTTACTAACTTTTCTAGCTGGCAATAGCATTTGTTGGATTAACACAGTTTGCTATGTTGTCACTATAAGGAACTTTGTATCTGATCGCCAAGTTGCTGTGGGAATAACAACCAGTTACCAAGGTTTAAGTGCAAAGATTTATACCAATATTGTTGATGCTGTTTCTCCTCACAAGAAAGCTAGAACCTTTCTCTTCCTGAACTCTCTCTTACCAGTGGTAGTTTGCCTAATAGCAACTCCTCTAGTAAGAGAAATTGAAGTCAAAAGTCCTAACCACATGAATGTTGGGTTTGCTGTGATGTTTGTTATTACAATTGCAACTGGAATATATGCTGTGATGAGCAGCTTGCAATTTGTCACAAGCAAAACATCCTCAATGGGTATCCTGATTGGTATTCTAGTGTCCCTTCTCTTGCCTCTGTTAGTTCCAGTTTCAGTGAAGATCAAGGAACTAGCAGGGTCATGGCATAAAAAAAGAGAAAGACTAAGAGTCTACCATTTTACTATGGAGGAGAATACTAATGAAGAGAGGGAAGAGAATGAGGTGAAAGAGGACGAAGATAGCATAGAAGTTCAAGAGGATGGTGCTATGGAAGAAATTGGAGTGAAGTTAATGCTAAGAAGAACAAATTTCTGGTTATATTTCTTTGTTTACTTTTTTGGTGCCACAATTGGTTTAGTATTTCTTAACAACTTGGGACAAATAGCTGAATCAAGGGGTTGCTCTGGTACTTCATCTTTGGTGTCTTTGTCTTCATCTTTTGGGTTCTTTGGCCGTCTCATTCCATCTCTTATGGACTACTTCTACAGGGGAAAAGGTAAAATTTCAAGACCTGCCTCTATGGTGGCAGTGATGGGTCCAACAGCTGGTGCATTCTTCTTACTACTCAATAAAACTGACCTTGCCCTTTACACCAGCACTGCCATAATTGGTGTGTGTACAGGAGTGATCACTTCTATAGCTGTTTCCACAACAGCTGAGCTATTTGGCACCAAACATTTCTCAGTGAACCATAATGTGGTGGTTGCAAACATTCCCATGGGTTCCTTTATGTTTGGTTACTCAGCTGCACTTGTTTACCGCAAGGAAGGGGGGCATGAACATGAGAAATGCATGGGCATGGAATGCTACAGTAACACTTTTGTAATTTGGGGTTCCTTTTGTTTGCTTGGGACTTTCTTAGCTTTGATTCTACATGCTAGGACTCGCAAGTTTTACTCACAATAG 1545 0.4091 MPSAAFQWLSLVGIIWLQAINGTNTNFPAYSSQLKQLLSISQVELNNLAFASDAGKLFGWFSGLASVYLPLWLVLIIGSFLGLIGYGVQYLFITNQIASLSYWHVFLLTFLAGNSICWINTVCYVVTIRNFVSDRQVAVGITTSYQGLSAKIYTNIVDAVSPHKKARTFLFLNSLLPVVVCLIATPLVREIEVKSPNHMNVGFAVMFVITIATGIYAVMSSLQFVTSKTSSMGILIGILVSLLLPLLVPVSVKIKELAGSWHKKRERLRVYHFTMEENTNEEREENEVKEDEDSIEVQEDGAMEEIGVKLMLRRTNFWLYFFVYFFGATIGLVFLNNLGQIAESRGCSGTSSLVSLSSSFGFFGRLIPSLMDYFYRGKGKISRPASMVAVMGPTAGAFFLLLNKTDLALYTSTAIIGVCTGVITSIAVSTTAELFGTKHFSVNHNVVVANIPMGSFMFGYSAALVYRKEGGHEHEKCMGMECYSNTFVIWGSFCLLGTFLALILHARTRKFYSQ. 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01655 514 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 513 - -
Seca5g01655 514 SUPERFAMILY MFS general substrate transporter 6 510 IPR036259 -
Seca5g01655 514 Pfam Nodulin-like 7 250 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01655 Seca-Chr5 50137197 50138946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01655 1 514 Nodulin-like Gene Family AT2G30300 48.134 5.87e-152 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01655 - - gmx:100800763 772.696