Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01653 ATGGCATACTTAAATCTCAAAACAAAGAATGTGCTACTTATTAGACCATCAAAATCCACTCCTCAATGTATTCTTTCACTATCCACACTTGACAATATACCCGAACATGATATCCTATGCCAAACCATTCATGTATACCGATCAACAATCCATGATTTTGATCCAGCTCATGTGATTAAAGAAGCACTCTCAAAGGCTTTGGTTTATTACTATCCTCTTGCAGGTAGGATAGTGAGACACACTGATGGAAAACTCAGAGTAAAGTGCACTACAGAGTATGGTGTTCCATTCTTGGAGGCAATTGCTAATTGCAACCTTTCTTCTCTTCATTACTTAGATGACACTGACACAGAAATTGCCAAACACTTGGTGCTTCATCTTCCTTCTCAAGATCAAAGTTGCTACCAATTTCCCCTGGTGTTCAAGGTGACTAAATTTCTTTGTGGGGGTTTCACAACTGGGATGGGGGTTTCACATGCTATTGTTGATGGCATTGGAGCTTCTCAATTCTTCCGAGCCATTGTTGAAATTTCAAGTGGAAGAAGTGAGCCCTCTGTGAAACCTGTGTGGGAAAGAGAAAGACTTGTGGGATCAATAACCAAACAACCACTTGAGAGTCCCATGGATATAGCCTCTGCTGCAGTTTCACCTTTTTTACCAACCACAGATATTGTGCATGATTGTTTCAAGGTGGAAAGAGAGATCATAACAAGGCTCAAGTTGAGTTTGATGAAGGAAGAGGAAAGTTTCACTACTTTTGAATCACTTGCTGCTTATGTGTGGAGATCAAGAGCCAGAGCATTGAAACTGAGCTACAATGGGAAAACTATGTTGAATGTCATAGTGGGAGCAAGACAGCATTTGGATTCTCCTTTGCCTGAAGGGTATTATGGGAATGCTATTGTGGATGCAAATGTTGTGCTGACAGTGAAGGAGCTCAATGAAAGGCCACTCTCAGAGATTGTGAAGCTCATCAGAGAGACAAAAAAGGTTGCTTTTACTGCTGATTATATCAGAAACTCAATCAACACTTTTGAGACAAAGCAAGAGGATTGTAACTTAGAGGGTACTGGTGCAGTCACGGTTCTGACAGAGTGGAAGCATTTGGGTTTCCTGGAAAAGGTAGATTTTGGAGGGAGTGAAGCAGTGAATATAGTGCCTGCACCATGCAACATGTTTGGATCTGTGGGTATGTGCATTTTCTCCTCTCCTTATAAATTTGAGGGTCCATCAATGAAAGGAGGAGTTAGGATTTTCACATCACTCCCCATTGCTGCAGTGCCTAAGTTCAGGGAGGAAATGGAAGCTCTCAGGCTTATCAAATGA 1326 0.4148 MAYLNLKTKNVLLIRPSKSTPQCILSLSTLDNIPEHDILCQTIHVYRSTIHDFDPAHVIKEALSKALVYYYPLAGRIVRHTDGKLRVKCTTEYGVPFLEAIANCNLSSLHYLDDTDTEIAKHLVLHLPSQDQSCYQFPLVFKVTKFLCGGFTTGMGVSHAIVDGIGASQFFRAIVEISSGRSEPSVKPVWERERLVGSITKQPLESPMDIASAAVSPFLPTTDIVHDCFKVEREIITRLKLSLMKEEESFTTFESLAAYVWRSRARALKLSYNGKTMLNVIVGARQHLDSPLPEGYYGNAIVDANVVLTVKELNERPLSEIVKLIRETKKVAFTADYIRNSINTFETKQEDCNLEGTGAVTVLTEWKHLGFLEKVDFGGSEAVNIVPAPCNMFGSVGMCIFSSPYKFEGPSMKGGVRIFTSLPIAAVPKFREEMEALRLIK. 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01653 441 Gene3D - 219 434 IPR023213 -
Seca5g01653 441 Gene3D - 3 205 IPR023213 -
Seca5g01653 441 Pfam Transferase family 8 436 - -
Seca5g01653 441 PANTHER ACYL TRANSFERASE 4 6 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01653 Seca-Chr5 50117848 50119173 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01653 4 388 Monolignol Biosynthesis Gene Families AT5G48930 27.981 2.55e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01653 K20240 - gmx:100783730 529.25