Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01651 ATGGCAAATCAGAACAACACACCCCTTTCCCTTGATATGAAGGAAGTTGTGATAGTTAAACCGTCCAAGCCCACACCTTCTGAGATTCTTTCTCTGTCCACCATTGACAATGATCTTAATCTCAACATTCTCTGTCAAACCATTTATGTGTACCAAGCAAATCATGATTTCCCAAATGGTAAAGTAGAACTAGACCCTGCTTATGTGATCAGAGAAGCCCTCTCAAAGGCTTTGGTTTACTACTATCCCCTTGCAGGAAAGATAATAACTTTGGATGATGGAAAACTTGGAATCAACTGCAATGCTGATGGGGTTCCATTCATGGAGGCAACTGCTAACTGTGAACTCTCTTCTCTTCACTATCTTGAAGGGATTGATGTTCCAACTGCACAGAAATTGGTGTTTGATAACCCTTCTCAAGAGGAAACTAGTCCCCATCCCTTGGTTTTCAAGGTGACCAAGTTTCTCTGTGGGGGTTTCACAATTGGAATGGGCTTGTCACACACTGTTTGTGATGGGTTTGGTGCATCTCAAGTCTACAGAGCCTTGGCTGAACTTGCAAGTGGAAAAAGTGAGCCTTCAGTGAAACCTGTGTGGGAGAGAGAGAGACTAGTGGGGACAGTTCTTAAACAACCACTCCAATTTCCCATAGATAAGACTTCAATGGCAGTCTCACCATTTTGGCCAATTACAGAGATTTCACATGAATGCTTTAACTTGAGTGGTGAGAACATACAAAGACTCAAAATGAAACTGATGAAGGAGAGTGATAGTGTGAAGGAAAGCTTCACAACTCTTGAAACACTTGGTGCTTATGTTTGGAGGTCAAGAGCTAGAGCTTTGAAATTGAGCACTGAAGGGAAAACTTTGTTCTGTTTAGCTGTGGGTGTCAGACACCTATTGGATCCACCTTTGCCTGATGGGTATTATGGGAATGCTTTTGTGGCTTCAAATGTGGTTCTAACAGTGAAAGAACTTAATGAAAAACCACTCTCAGAGGTTGTGAAGCTCATCAAAGAGAGCAAAAAGCTTCCTTGTAATACTGAATATGTCAAATACTCAATCAACATGTTGGAGACAATGAGGAAAGAGAATTTAAGAGTTGAAGGAACAGGTGCATCTATGGTATTAACAGATTGGAGGCAACTGGGTTTGTTGGAAGAAGTGGATTTTGGGTGGAAGGCTTCAGTGAATATAGTACCAGTGCCATGGAACATGTTTGGGTACGTTGATTTGTGCCTTTTCTTGCCTCCAAGTAAGTTGGATCCTTCAATGAAAGGAGGAGTTAGGATATTTGTATCCCTCCCCAAAGCTTCCATGCCCAAGTTCAAGGAAGAGATGGAGGCCCTCAAGCTTATGAGAGGTGATGAGGGTAGCACCTAA 1383 0.4223 MANQNNTPLSLDMKEVVIVKPSKPTPSEILSLSTIDNDLNLNILCQTIYVYQANHDFPNGKVELDPAYVIREALSKALVYYYPLAGKIITLDDGKLGINCNADGVPFMEATANCELSSLHYLEGIDVPTAQKLVFDNPSQEETSPHPLVFKVTKFLCGGFTIGMGLSHTVCDGFGASQVYRALAELASGKSEPSVKPVWERERLVGTVLKQPLQFPIDKTSMAVSPFWPITEISHECFNLSGENIQRLKMKLMKESDSVKESFTTLETLGAYVWRSRARALKLSTEGKTLFCLAVGVRHLLDPPLPDGYYGNAFVASNVVLTVKELNEKPLSEVVKLIKESKKLPCNTEYVKYSINMLETMRKENLRVEGTGASMVLTDWRQLGLLEEVDFGWKASVNIVPVPWNMFGYVDLCLFLPPSKLDPSMKGGVRIFVSLPKASMPKFKEEMEALKLMRGDEGST. 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01651 460 Gene3D - 230 447 IPR023213 -
Seca5g01651 460 Pfam Transferase family 11 449 - -
Seca5g01651 460 Gene3D - 8 214 IPR023213 -
Seca5g01651 460 PANTHER ACYL TRANSFERASE 4 10 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01651 Seca-Chr5 50099236 50100618 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01651 9 445 Monolignol Biosynthesis Gene Families AT5G48930 25.328 2.74e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01651 K20240 - gmx:100801843 771.155