Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g01646 | ATGACCACCTCCTTCTCTGACCTGCTTGATTCTCCCACCAACCACAACCTCGGAGGCTCAGAAAGGCCTCATGAGTTGTCGGATCCAACTGGTTCAGGTGTTCCCAAATTCAAATCTGCTCCTCCTCCATCTCTTCCTCTCTCTTCTATTTCTCATCCTACTCCTCCTCCAATTTCTCCTTCTTTCTTTGTTTTCCCTCCTGGCCTGAAACTTGCTGAGCTTCTTGACTCTCCTGTTCTCCTCAACTCTTCTAATAAAACTTTGTCATCTCCAACAACTGGAGCATTTGGCAATCAAGGCTTCAATCACCACAATGTTAAGGAAGAAGACAAAAGCTTCTCAACTTTCTCCTTCCAAACCCAATCACAGCCTTCTCTTTCATCCACAGCTGGATTTCAATCTTCAACAGGCATTGCTCAAACTGTAAGTGACCAATTTCAATACACAAGACTCATTTATGCAAATTCTATGGAAACGGATAGGTTTTCTGGTAGAATGAACATGAGTGTGGTGAAAACTGAAGGCTCTTCTTCTATACAGAGTTTCACCCCTGAGAATGTTGCTAGTGTGCAAAATAACTACAAGAGTGGTTTGCAATCTGATAATAACAATTACCACCCACAATTTCAGACCTTAAACAAAAGGTCAGATGATGGGTACAATTGGAGGAAATATGGGCAAAAACAAGTGAAAGGAAGTGAAAATCCAAGAAGCTACTACAAATGTACATACCCCAATTGCCCAACAAAGAAAAAAGTTGAGAGGTCTTTAGAAGGGCATGTTACTGAGATTGTTTACAAAGGTACTCATAACCATCCAAAGCCTCAGGCTACAAGGAGAAACTCTGGATCATCACTTGCAATTCCTCCTTCAAATCATGTCAGCAATGAAATGCCAGATGCCAGTCATGGTAGTGGACACATGGATTCGGTTGCTACACCTGATAACTCATCAATATCAATGGGAGATGATGATTTTGAACAGAGTTCCCAAAAGAGTAAATCAGGAGGAGAGGACTTTGATGAAGATGAACCTGGTGCCAAAAGATGGAGAATAGAAGGTGAAAATGAGGGCATATCAGCAGCTGGAAGTAGAACAGTGAGAGAACCCAGAGTTGTGGTTCAGACAACCAGTGAAATCGATATTCTAGATGATGGGTACAGATGGAGGAAATATGGGCAGAAAGTAGTAAAGGGAAATCCAAATCCAAGGAGTTACTATAAGTGCACAAACCCAGGATGTCCAGTGAGAAAGCATGTAGAGAGAGCCTCAAATGACTTAAAGGCAGTGATCACAACCTATGAAGGAAAGCACAATCATGATGTCCCTGTGCCACGTGGCAGTGGCTGCCAATCTGTTAACAGACCACTGCCAACCAATGCCACAAACAACACCATGAGTTCAACTCCTATGACTCAATACACTAACAATTCAGTCAACAATTCTCTTCAAAGTTTTAGACCACCAGAAGGGCAAGCACTCTTCACCCCTGAAATGATGCAGAGCCCTGGAAGCTTTGGATTCCCAGGGTTTGGGAATCCAATGGAATCTTACATGAACATGATGAATCAGCAATCTGACAATAATAATGTGTTCTCCTCTAGAGCCAAAGAGGAGCCTGTAGATGACTCGTTTCTTGATTCTTTGCTATGCTAA | 1656 | 0.4239 | MTTSFSDLLDSPTNHNLGGSERPHELSDPTGSGVPKFKSAPPPSLPLSSISHPTPPPISPSFFVFPPGLKLAELLDSPVLLNSSNKTLSSPTTGAFGNQGFNHHNVKEEDKSFSTFSFQTQSQPSLSSTAGFQSSTGIAQTVSDQFQYTRLIYANSMETDRFSGRMNMSVVKTEGSSSIQSFTPENVASVQNNYKSGLQSDNNNYHPQFQTLNKRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLEGHVTEIVYKGTHNHPKPQATRRNSGSSLAIPPSNHVSNEMPDASHGSGHMDSVATPDNSSISMGDDDFEQSSQKSKSGGEDFDEDEPGAKRWRIEGENEGISAAGSRTVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASNDLKAVITTYEGKHNHDVPVPRGSGCQSVNRPLPTNATNNTMSSTPMTQYTNNSVNNSLQSFRPPEGQALFTPEMMQSPGSFGFPGFGNPMESYMNMMNQQSDNNNVFSSRAKEEPVDDSFLDSLLC. | 552 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g01646 | 551 | MobiDBLite | consensus disorder prediction | 275 | 299 | - | - | |
Seca5g01646 | 551 | ProSiteProfiles | WRKY domain profile. | 378 | 443 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca5g01646 | 551 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Seca5g01646 | 551 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Seca5g01646 | 551 | MobiDBLite | consensus disorder prediction | 265 | 362 | - | - | |
Seca5g01646 | 551 | FunFam | WRKY transcription factor | 205 | 276 | - | - | |
Seca5g01646 | 551 | MobiDBLite | consensus disorder prediction | 327 | 355 | - | - | |
Seca5g01646 | 551 | MobiDBLite | consensus disorder prediction | 309 | 326 | - | - | |
Seca5g01646 | 551 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 75 | 476 | IPR044810 | GO:0003700 | |
Seca5g01646 | 551 | SUPERFAMILY | WRKY DNA-binding domain | 375 | 443 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Seca5g01646 | 551 | SUPERFAMILY | WRKY DNA-binding domain | 215 | 275 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Seca5g01646 | 551 | Gene3D | WRKY domain | 370 | 436 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Seca5g01646 | 551 | SMART | WRKY_cls | 383 | 442 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca5g01646 | 551 | SMART | WRKY_cls | 216 | 274 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca5g01646 | 551 | Pfam | WRKY DNA -binding domain | 384 | 440 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca5g01646 | 551 | Pfam | WRKY DNA -binding domain | 217 | 273 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca5g01646 | 551 | FunFam | WRKY transcription factor 33 | 370 | 436 | - | - | |
Seca5g01646 | 551 | ProSiteProfiles | WRKY domain profile. | 217 | 275 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca5g01646 | 551 | Gene3D | WRKY domain | 202 | 276 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g01646 | Seca-Chr5 | 50017351 | 50020440 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g01646 | 2 | 443 | WRKY Transcription Factor Family | AT2G30250 | 44.000 | 2.38e-91 | 284 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Seca5g01646 | WRKY | 1.7e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g01646 | K13424 | - | gmx:100127385 | 677.937 |