Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01644 ATGTCTCTCAACCACTCTTATGCTGCTCCATCCATGGAAGCAGGCCAGGACAAGCTCATTCAGAATGCCCTGCATGTTGCAACAGAGTCACACCCACAGTTTGGAGGGTCTTTCATATGCCATACAATTAATCACATCAACTCAAGGGGACGCTGGTTAGGAGATGACCCACTTGACTTTTCTGTCCCTCTCTTCTTGCTCCAGCTTTTCCTCATGTTCATCTTCACCCGCTTAATTTACCTTATTCTCAAGCCCTTTGGTCAACCTTCTTTTGTTTCTCATATTCTTGGTGGTGTGACTTTAGGTCCTTCAATTCTTGGACACAACTCAGCATTTGCAGACAGGATTTTCCCATCAAAAGGAAGAAATGTGCTTGACACCTTGGCATTTTTTGGTTTCATGTTATTCATCTTCATACTTGGGGTAAAGATAGATCCAACCATAATTTTCAGATCAGGTAGAAGGACTTTTACAATAGGAATTTTAGGCTTCTTTGTTCCTTACACTCTTGCTGGAATGGTTGTCTTTCTCCTCAATCGGTTTGCATCATTGGATGATGATGTTTCTAACGTGCTTCCTACTGTGGTAGAAATTCAATGCATCACATGTTTTCCAGTAATTTCTTGCTTTCTTGCTGAACTTCAGATCCTCAATTCAGAGATTGGGCGGTTGGCCTCCTCTTCTTCACTAGTGTGTGATATTTGCTTCTGTATAGTTGCATCAATAAAGTTTGCTACTAAATTATCCTTCACAAAGTCAATAGGAGTAACTATTGGATCTGTCTCATCCACCACTCTTCTTGTTTTGTTCATTGTGTTTGTTGTTCACCCAGCTGCATTATGGGCAATTCAACAAACACCAGAGGGGAAACCTGTTCAGGAAATTTATATTTGTGGGGTTCTTGTAACACTAATGTTCTGTGGATTCATGGGTGAAGTAATTGGCCTAAATGCAATTGTTGTATCTTTCATGGTGGGGCTGGCTATACCAGATGGACCACCATTAGGAGCAGCACTGGTAGATAAGCTTGACTGTTTTGTTTCAGTAGTCTTCATACCTATCCTTTTTGTTGTAGTTGGATTGAGGACAGATGTTTATGCCATACAAAAGATGAAGAATTGGGGGATAATTCAGTTAATTATTTGCATTGCTTTTTGTGGGAAAATCATAGGGTCTTTGTTGCCTCTCCTTTGCTGTAGGGTGCCATTTCGAGATGCCCTTTCTCTTGGTCTTATAATGAACTGCAAAGGCACTGTTGAACTGGCTTTGTTGATTGACTTGAAATTAAAAGATGCCATGAGTGATGAATGCTTTGCAATTTTGGTTCTTACTTTAGTACTTGTAACTGGTATTGTGGCACCTGTGGTGAAAGCACTATATGATCCTTCCAGGAGGTTTCTTGCTTACAGAAGAAGGACAATCATGCATCACAACAATGATGAAGAATTGAGGATACTAGCTTGCATCCACAAACAAGATAATGTCTTGGCTACTTTGAACCTTCTTGCTGCTTCCAATCCCACTGAATCAAGCCACATTGATTTAGTTGTGCTCCATCTTGTTAAGCTTGTAGGCCAAGCTTCCTCTCTTCTTGTTGCACATATACCACGCGAAAATCCTAGTCAACGTCCTACTCAATCTGAAAAAATTTTCAGCTCATTCAGCAAATTTGAACAAGCATACAGGGGCAAAGTCACATTGCATTGCTATAAAGGCATCTCCCCATATGCTACAATGCACAATGATGTGTGCTACTTGGCACTTGAAAAGAGAACAACTTTCATAATCATTCCTTTTCATAAGCAGTGGATAATTGGAGGGATGACTGAGTCATCTTTTGCCTTCAAGCAGCTCAACAAGAATGTTCTAGAGAAAGCTCCTTGCTCAGTTGGGGTACTCATTGATCGTGGCAGTCAGAAGAGATTTTGGTGTGGCTATATGAATGAATCAATATATCAAGTGGCTGTGTTCTTCTTTGGGGGTGCAGATGATAGAGAAGCACTTGCATATGCAAAGCGCATGTTGGATCAACCTAATGTACATATTACTCTTTTTCATTTTTCATCTTCAATAGAGATTGTTGGTGGTACTGATAGGAGCAAAATGCTAGATACCCAAATCTTGAGTGAATTTAGGCTCAGTGGTTTCCGGAATGATAGAGTTTCTTACAAAGAAGAGATGGTAATGAAAGGAAGGGATGTGCTTTCAGTTATAGAATACATGGAGAACTTTTATGACCTTGTCATGGTTGGGAGGAGGCATGCAGATTCAAAATTGATGTCTGAACTTAGAAAATGGAAGCATGGAGAGTTGGGAATTGTAGGAGAGCTTCTTGCCTCTTTAAATATTGGAGACAAAACATCAATTTTGGTGGTGCAACAACAATTCAAATTTTGGGGATCACGTGATCCTGAGGACTCCACACACTTGAGAAGAGACAAAAGGCATGAAGGAGTTTGCATGATTCATGCAATGGTTTTTACAGGATTTATTATGGTGATGACCTTTGGAACATTAACTTTGATTAAATCTGTTGAAATGGATGATGAAAAGCTAGATGACCTGAGTTCCACTGGAATGATTGGTAATGAGAAACTAGTATGTCAATATATTGAAAAACATGCAACAAGGGGAATATGGCTTGGAGATAATCCCCTCCATCACACCACATCTGTCCTCATAGTTCAAATTACTCTTATATTCATTATCAGTAGAACTACTCATCTCTTGTTGAGGCCTTGTCATCAAACTCTTCTCATTTCACAAATTGTGGCTGGTATCATATTGGGTCCTTTGCTTCTAAGTAGAAACAAATCAGGTTATGAGTTGCTATTTCCAGCAGCAAGCAAAATGACACTTACAACATTTGCAGAATTTGGCATGATAATTCATTACTTTAAGATGGGGGTGCAGGTTGATCCCACATTAATCTTTAAGATTGAAAAGCAGGCAATGATAATTGGCATAGTAGGCCATGTGACTTCTATAGTGCTTAGCAGTGCAGTTTTAAATGTTGTTGATATAATCAACCCTCTAGGATCTGAAGAGGCTAGTGTTCATGGTTTGGTAGTTGTTGGTGCCCTGACTGCATTTCCTGTTATAAGTAGCTTCCTCAATGAGATGAACATTCTCAATTCAGAAGTTGGACGCATGGCTTTATCTACTTCCATGGTTAGTGATGTATGCATGTGGGTGCTTTATTTTGTAGTAGTCAATGCTGCTAAAGGCTGGGAACTTGCCTCATATAAACCTTTTCTACAATTGGGTTCCTCAATTTTTTTTTTTGCCATCTTATTCTTCATGCTAAGGCCACTTGTTATATGGATCTCCAACAGAAATCCACAAGGAAAACCTATGACAGAGAGCCATTTCTTGTCAATAATGTGTATACTTCTTGTTGTTGCATTCTCTGCAGAAGTTTCTGGGCAACCTCCTTTCATTGTTGCTTTTTGGTTTGGTGTAATCTTGCCAGATGGTCCCCCTTTAGGTTCTGTTTTGGCAGAAAGGCTTGATACAGTTGGTTCTACTTTGATTGTTCCAGCTTATTGTGTAATTACTGGGCTGAAGACAAGTATTCCTTCATTAGGAGAATCAAAATCAGCAAGAACAGAGTTTATCATTATTGCAGGGTATATAGGCAAGTTTGCAGGCACCATCCTACCCTCACTTCACTTTCAGATTGAATTCTGGGATTCTTTTGCACTGGCTCTAGTCATGTGTTGCAAAGGCCTCATAGATCTCTCTGTGTACAACATACTATTAAACTCTAAGGACATAAGTGAATTGAGCTTCACCCTTATGATATATACTATGGTGATTGTAACCGGGTTTGCAACTATAGTTCTCTATTTTATATATGATCCTTCAAGGAGATACAAAACCTATATCAGAAAATCAATCAAGGACTCACAGAAGGACCTTGATCTCAAAGTACTTGTGTGTGTCCACAAGGAAGAAAATGTATATCCAATCATCAATCTTCTTCAAGCCTCTAACCCCACAAAGGACACACCTCTCTCAGTTTTTGTTGTGCATCTCATGGAACTCTCAGGCAGAGCAGCCTCTGTCCTTACTGTAAACAAGAGCACTAACAAGTCATGTCCTAATAAGCAGACTTCCTCTCAACATATAAGCAATGTCTTTGATCAATTTCAGCTGCATAACAAAGGGTGTGTCACATTGCAGTGTTGTACTGCAATTGCACCATATGCAAGCATGCATGATGACATATGCTACATGGCAATGGACACTAAATCCAACATTGTGATTGTGCCATTCCATAAAGAATGGTTCTTGAATGGAACTGTTGAGGATTCCAATGCATCAATTAGGACAATAAACCAGAAAGTTCTAAATAAAGCTCCTTGTTCTGTTGGAGTCTTGATTGACAGAAGCCAAATGCGTGGGAAGCTATTAGTTGTATGTGAGAAATCATTTTGTGAAATTGCCATGATTTTCTTAGGTGGTGATGATGACCAAGAGGCACTGGCTTATAGTATACGCTTAGCTCAACATCCAAATGTAAGACTAACAGTGTTTTGGATAAGGGTAAATTATCAACGCAAACATTGGAATATGAAGAACCCTTATGTTGATTTGGTGGAGCATACAAGGTATAGCAATAGCCATAAAGGGAAAGTGATCTTTAAGGAGGAGGTAGTGGAAGATGGGGCAGGAACAACACAATTTATTCGAACAATGGAGGGACAATTTAGTTTGATCATAGTGGGTAGACACCATATACCAGATTCTCCATGTACATTAGGCTTAACAGAATGGTGTGAACTACCTGAGCTTGGGCCAGTTGGCAACCTCCTAGCCACATCAGATTTTACATTTTCAGTTTTGGTGGTGCAACAACAACCTTGTAACTATGATTTTCGGTGTATTAGGTGA 4896 0.3956 MSLNHSYAAPSMEAGQDKLIQNALHVATESHPQFGGSFICHTINHINSRGRWLGDDPLDFSVPLFLLQLFLMFIFTRLIYLILKPFGQPSFVSHILGGVTLGPSILGHNSAFADRIFPSKGRNVLDTLAFFGFMLFIFILGVKIDPTIIFRSGRRTFTIGILGFFVPYTLAGMVVFLLNRFASLDDDVSNVLPTVVEIQCITCFPVISCFLAELQILNSEIGRLASSSSLVCDICFCIVASIKFATKLSFTKSIGVTIGSVSSTTLLVLFIVFVVHPAALWAIQQTPEGKPVQEIYICGVLVTLMFCGFMGEVIGLNAIVVSFMVGLAIPDGPPLGAALVDKLDCFVSVVFIPILFVVVGLRTDVYAIQKMKNWGIIQLIICIAFCGKIIGSLLPLLCCRVPFRDALSLGLIMNCKGTVELALLIDLKLKDAMSDECFAILVLTLVLVTGIVAPVVKALYDPSRRFLAYRRRTIMHHNNDEELRILACIHKQDNVLATLNLLAASNPTESSHIDLVVLHLVKLVGQASSLLVAHIPRENPSQRPTQSEKIFSSFSKFEQAYRGKVTLHCYKGISPYATMHNDVCYLALEKRTTFIIIPFHKQWIIGGMTESSFAFKQLNKNVLEKAPCSVGVLIDRGSQKRFWCGYMNESIYQVAVFFFGGADDREALAYAKRMLDQPNVHITLFHFSSSIEIVGGTDRSKMLDTQILSEFRLSGFRNDRVSYKEEMVMKGRDVLSVIEYMENFYDLVMVGRRHADSKLMSELRKWKHGELGIVGELLASLNIGDKTSILVVQQQFKFWGSRDPEDSTHLRRDKRHEGVCMIHAMVFTGFIMVMTFGTLTLIKSVEMDDEKLDDLSSTGMIGNEKLVCQYIEKHATRGIWLGDNPLHHTTSVLIVQITLIFIISRTTHLLLRPCHQTLLISQIVAGIILGPLLLSRNKSGYELLFPAASKMTLTTFAEFGMIIHYFKMGVQVDPTLIFKIEKQAMIIGIVGHVTSIVLSSAVLNVVDIINPLGSEEASVHGLVVVGALTAFPVISSFLNEMNILNSEVGRMALSTSMVSDVCMWVLYFVVVNAAKGWELASYKPFLQLGSSIFFFAILFFMLRPLVIWISNRNPQGKPMTESHFLSIMCILLVVAFSAEVSGQPPFIVAFWFGVILPDGPPLGSVLAERLDTVGSTLIVPAYCVITGLKTSIPSLGESKSARTEFIIIAGYIGKFAGTILPSLHFQIEFWDSFALALVMCCKGLIDLSVYNILLNSKDISELSFTLMIYTMVIVTGFATIVLYFIYDPSRRYKTYIRKSIKDSQKDLDLKVLVCVHKEENVYPIINLLQASNPTKDTPLSVFVVHLMELSGRAASVLTVNKSTNKSCPNKQTSSQHISNVFDQFQLHNKGCVTLQCCTAIAPYASMHDDICYMAMDTKSNIVIVPFHKEWFLNGTVEDSNASIRTINQKVLNKAPCSVGVLIDRSQMRGKLLVVCEKSFCEIAMIFLGGDDDQEALAYSIRLAQHPNVRLTVFWIRVNYQRKHWNMKNPYVDLVEHTRYSNSHKGKVIFKEEVVEDGAGTTQFIRTMEGQFSLIIVGRHHIPDSPCTLGLTEWCELPELGPVGNLLATSDFTFSVLVVQQQPCNYDFRCIR. 1632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01644 1631 PANTHER CATION/H + ANTIPORTER 39 795 - -
Seca5g01644 1631 FunFam Cation/H(+) antiporter 15 64 467 - -
Seca5g01644 1631 FunFam Cation/H(+) antiporter 15 892 1293 - -
Seca5g01644 1631 Pfam Sodium/hydrogen exchanger family 899 1282 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca5g01644 1631 Pfam Sodium/hydrogen exchanger family 72 456 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca5g01644 1631 Gene3D - 890 1294 IPR038770 -
Seca5g01644 1631 Gene3D - 64 466 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01644 Seca-Chr5 49988031 49995980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01644 26 814 Antiporter Super Family AT2G13620 38.217 2.18e-175 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01644 K26731 - gmx:102665255 1241.1