Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01641 ATGGCTGAAAACGGCGAAGAGAAGTTACTCGCTGTGGCGCGGCACATAGCAAAGACGCTGGGTCACAATAACCACAACATGGCCGATGATATCCTTCAAATATTCTCCAACTTTGACGGTAGATTCTCCAAGGAGAAGTTATCCGAAGATGGCGCAGGAAATGATCCCATGGGCTGTGCCGCACTCGAACAAACCCTCAACTCTCTCGACCGTCGAATTTCCCGCCACGTGTCCTCCGATGCGCCTATCTGGTCAAACTCCGCAGACTCCACCTCCTTCCTCGCCGCCATCGACGAACTCGTCGCTACCATCGACGACTGGAGCCCCCTTGCCGACGACAAGACCGTCGGCGCGTGCCTCCTACGCGCCGATGACATGCTACAGCAGGCCATGTTCCGCGCTGAGGACGAGTTCCGCTCTCTTATGGAACTCGGCGGCGAGTCGTTCGACCTGACTCGGGGCAACGGGGAGTCAACTCGAAATGACGACTCACTGTTTGACTCGAATGACGACGAAGAAGACGAAGAGCTGATTCCGGTGGCGCAGCCGGTGGCAGATTACGACGTGGTGATTGACGCGTTGCCTCTGGCGACGGTGAACGACCTCCGTGAGATCGCGAAGCGCATGGTGGCGGCGGGGTTCGGGAAGGAGTGTTCGCATGCTTACGGCGGTTGCCGGAGGGAGTTCTTGGAGGAGAGCTTATCGAGGTTAGGGTTGCAGAAGCTGAGCATTTCTGAGGTTCACAAGATGCCATGGCAGGAGCTCGAAGACGAGATCGAGCGATGGACCAAAGCCTCCAAAGTCACACTCAGAATCCTTTTCCCCAGCGAGCGACGTCTCTGTGATCGCGTCTTCTCTGGCTTCTCATCCTCCGCCGCCGCCGACCTCTCCTTCATGGAGGTCTGTCGTGGATCGGCGATTCAGCTACTGAACTTCGCCGACGCCGTGGCGATCGGTAGCCGTTCGCCTGAGCGGTTGTTCAGGGTCCTCGACGTGTTCGAGACGATGCGTGACCTAATTCCCGAATTCGAATCGTTGTTCTCTGATCAGTACTGCGCGTTCCTCGTTAACGAAGCGATCACGATTTGGAAGAGGTTAGGGGAAGCGATAAGGGGAATTTTCATGGAATTGGAGAACCTAATCAGCCGCGATCCGGCGAAGGCGGCGGTTCCCGGCGGCGGGCTTCATCCCATCACTCGCTACGTGATGAACTACCTCCGCGCCGCATGTCGTTCGCGGCAAACTCTAGAACTAGTTTTCCAAGAGAATGTGCTTTCGATAAAGGATTACCCTAAGCTTGATGACAGGTTGCAACCCAATTCTTCGTTATCTGTTCAAATTGCTTGGATTATGGACTTGTTAGAACGCAATTTGGAAGCAAAATCTAAAATTTACAAGGACACTGCTTTGTGCTTTGTTTTCATGATGAATAATGGGAGGTACATTGTTCAGAAGGCGAAAGATAGCGAATTGGGAGCCCTTTTGGGTGATGATTGGATCCGAAAACACACTGCCAAAGTCCGGCAATGCCACGTGAGCTATCAAAGAAGCTCATGGAACAAGTTGTTGGGGTATCTCAAGGTGGAGAATAATGGGTCAATATCAATGGCAGCAAAGCCTATGAAGGAGAAGCTCAAGTTGTTCAACTTGCATTTTGAGGAGATATGCAGGATTCAATCTCAGTGGTTTGTCTTTGATGAGCAGCTCAGGGAAGAAATAAGGATCTCACTGGAGAAGATCCTGTTGCCTGCATATGGAAGCTTCATTGGAAGGTTCCACAATGTTCCGGAGCTCGGTAAGAATGCTGATAAGTATATTAAGTTTGGAATGGAGGACATTGAAGCTCGGCTTAACGATTTGTTTCAGGGAAGCAGTGGATCAAATGGTGGTCGAAAGTGA 1899 0.5203 MAENGEEKLLAVARHIAKTLGHNNHNMADDILQIFSNFDGRFSKEKLSEDGAGNDPMGCAALEQTLNSLDRRISRHVSSDAPIWSNSADSTSFLAAIDELVATIDDWSPLADDKTVGACLLRADDMLQQAMFRAEDEFRSLMELGGESFDLTRGNGESTRNDDSLFDSNDDEEDEELIPVAQPVADYDVVIDALPLATVNDLREIAKRMVAAGFGKECSHAYGGCRREFLEESLSRLGLQKLSISEVHKMPWQELEDEIERWTKASKVTLRILFPSERRLCDRVFSGFSSSAAADLSFMEVCRGSAIQLLNFADAVAIGSRSPERLFRVLDVFETMRDLIPEFESLFSDQYCAFLVNEAITIWKRLGEAIRGIFMELENLISRDPAKAAVPGGGLHPITRYVMNYLRAACRSRQTLELVFQENVLSIKDYPKLDDRLQPNSSLSVQIAWIMDLLERNLEAKSKIYKDTALCFVFMMNNGRYIVQKAKDSELGALLGDDWIRKHTAKVRQCHVSYQRSSWNKLLGYLKVENNGSISMAAKPMKEKLKLFNLHFEEICRIQSQWFVFDEQLREEIRISLEKILLPAYGSFIGRFHNVPELGKNADKYIKFGMEDIEARLNDLFQGSSGSNGGRK. 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01641 632 FunFam Exocyst subunit Exo70 family protein 76 628 - -
Seca5g01641 632 SUPERFAMILY Cullin repeat-like 84 621 IPR016159 -
Seca5g01641 632 Gene3D Exocyst complex component Exo70 81 630 - -
Seca5g01641 632 PANTHER EXOCYST COMPLEX PROTEIN EXO70 60 623 IPR004140 GO:0000145|GO:0006887
Seca5g01641 632 MobiDBLite consensus disorder prediction 150 173 - -
Seca5g01641 632 Pfam Exo70 exocyst complex subunit 260 619 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01641 Seca-Chr5 49904654 49908145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01641 1 632 EXO70 exocyst subunit family AT5G58430 69.829 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01641 K07195 - gmx:100803694 932.939