Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01634 ATGACTAGGGCATTCCCAGCTTACCATTCGCCACAAACGCCCAATGGATGGCACAAGCATTTTCATCCTTCCCATGCCTTGCAAGGAACCATGGAAAATGTTGCTAATGGGTCTGCAATTCCCTTTTCCATTGTATGTGAGACAAGAAAAGAGTTTGACCATTCACCTGGCATCTTTAGTGGTGACAATCCATTCACTCACTCCTTCCCACTAATAATGTTTCACCTCGTTCTCATCATCACCATCACCCGCATTGTTCGTTTTCTTCTTAAGCCTCTCAGACAACCTATAATCATCTCTCAGATAATTGGTGGTGTCATTGTTGGACCTTCCTTTCTAGGACGCAGTAGATGGTTTCAACGTCACATGACAACTGAGGCAGCACAATTCCTTATTAACAATCTTGGAGTGATGGGGTTTATGTTCTTTTCCTTTATTTATGGTGTAAAGATGGACATTGGCCTTTTAAAAAAATCAGGAAAAGTGCATGTATCTACAGCATTGTTTGGTATAGCTATACCCACAATAGCAGTATTTATTGTGGCATTATGTATGAGACGTAACATGGACAAAGAATTATCCACAATTTCTTCAATAGGAGTACTTGCAGGGTACTTGGGGATAACGGCATTTCCTGTTCTCTACAATATCCTCAAAGAGCTTAACCTTCTAAACTCAGACATTGGTAGAGTTGCATTATCAACGGCATTAATTAGTGATGTGTTTGGGGTGAGTACAGTTGTAGCATTTGAGGCAGGAAAACAAGGAGAAACAAAGGCAGATAATGCCTTGTGGTATATGATTTCTCTTGTGATTATTATAGCATTCATTTTGTTTTGTGTTAGGCCTGTAATGGTATGGATTAATAACAATACTCTAGAAGGCCAGCCAGTTGATCAGTCTTTTGTGGTTGCCATTCTTCTTGGAGTTTTTTTAATGGGCTTTATAACTGACATGTTTGGCATAGCAATTGTTAATGGGTCGTTGTGGTTGGGCTTGGTAGTTCCAGATGGGCCTCGTTTAGGAGCAACACTAGAACATAAGAGCAAGACAATTATGAAGGAGTTCCTTATGCCGTTCTCATTCATTATGGTAGGGTCACATACTGATTTTTATACCTTAGGTGCTACTGAATGGTCAAGGTTGGCACCATTATTTTTCATGGTTTTAACTGGCTACTTGACCAAATTCTTTTCCACATGGATGGCTACATTCTATTGGCGGATGGCACCTAGGGATGGACTAACCCTTAGCCTCATTATGAGCTTAAGAGGCCAAGTTGAACTTATATTGTTTGTGCATTTCATGGATAAAAAGATCTTGAAGTTGCCAGGCTTCACATTATTGGTCCTTATGACAACAATATTGACTGCAACTTTCACTCCTCTTATCTCCATATTATATGATCCAACAAGGCCATACATGGTAAACAAAAGGAGGAACATCCAACACAACCCTCCAGACGAAGAGCTTAGAATAGTTTTATGTATTATTGACCCTGAAATGACTATAAATAGCCTTATCCATCTACTTGACATCTCTTCTCCAGCCTCAACAAGCCCACTTTCAGTGTATGCTCTTAGGCTAATTGAGCTTGTAGGTCGTGCCAATCCGTTGTTCATAAACCATGCAAAACAACAAGTGCCTACCATTTATCAATGGACACACACCATAAATGTCCTTGAACGTTATCAACAACTTAAAGGAGTGTTTGTGAAGTTCCAATTTTTCACAACTGTGGCACCAAAGCAAACAATGTTCCGAGATATCTGTGAGCTCGCCCTTGAAAAAAAAGCCTCTTTAATCATCTTACCTTTCAAAATGGGTGGTCTTAGAATAGTGAATTCACAAGTATTAAACCACGCACCTTGCTCTATTGCAATTCTTGTGGATAAGGGTCTTCTTGAAACCACCAACACCACAACCATAGGCAATTCATTTCGTCAATCTGGATACCGATTTGCTGTGTTGTTTCTAGGAGGTGCAGATGCTAGAGAGGCTCTTGTTTATGCAGATAGGATGATTGCAAACCAAGATGTTTCCTTGACAGTGATACGGTTTCTCTCTTATAACAATATGGGAGATAATGAAATGGAGAAGAAGCTTGATGATGGAATTGTGACTTGGTTTTGGGTTAAGAATGAGATAAATGAAAGAGTGGTGTATAAAGAGGTGGTGGTTACAAATGGAGAGGAAACAATTGCAGCAATTCAGGCAATGAACGATGTTGGTTTTAATCTTTTGATAGTGGGAAGGAAACAGGGGATAAACCCTGTTTTGCTTACTGGGTTGTCAGAATGGAGTGAAAATGAAAGTGAAGAGTTGGGACTCATAGGAGACTATGTTTCCTCTCAAGATTTTTCTAGCTCAGCTTCTGTTTTAGTAGTACAACAACAAATCTTAAGAGGATAA 2412 0.3964 MTRAFPAYHSPQTPNGWHKHFHPSHALQGTMENVANGSAIPFSIVCETRKEFDHSPGIFSGDNPFTHSFPLIMFHLVLIITITRIVRFLLKPLRQPIIISQIIGGVIVGPSFLGRSRWFQRHMTTEAAQFLINNLGVMGFMFFSFIYGVKMDIGLLKKSGKVHVSTALFGIAIPTIAVFIVALCMRRNMDKELSTISSIGVLAGYLGITAFPVLYNILKELNLLNSDIGRVALSTALISDVFGVSTVVAFEAGKQGETKADNALWYMISLVIIIAFILFCVRPVMVWINNNTLEGQPVDQSFVVAILLGVFLMGFITDMFGIAIVNGSLWLGLVVPDGPRLGATLEHKSKTIMKEFLMPFSFIMVGSHTDFYTLGATEWSRLAPLFFMVLTGYLTKFFSTWMATFYWRMAPRDGLTLSLIMSLRGQVELILFVHFMDKKILKLPGFTLLVLMTTILTATFTPLISILYDPTRPYMVNKRRNIQHNPPDEELRIVLCIIDPEMTINSLIHLLDISSPASTSPLSVYALRLIELVGRANPLFINHAKQQVPTIYQWTHTINVLERYQQLKGVFVKFQFFTTVAPKQTMFRDICELALEKKASLIILPFKMGGLRIVNSQVLNHAPCSIAILVDKGLLETTNTTTIGNSFRQSGYRFAVLFLGGADAREALVYADRMIANQDVSLTVIRFLSYNNMGDNEMEKKLDDGIVTWFWVKNEINERVVYKEVVVTNGEETIAAIQAMNDVGFNLLIVGRKQGINPVLLTGLSEWSENESEELGLIGDYVSSQDFSSSASVLVVQQQILRG. 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01634 803 Gene3D - 71 472 IPR038770 -
Seca5g01634 803 Pfam Sodium/hydrogen exchanger family 77 463 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca5g01634 803 PANTHER CATION/H + ANTIPORTER 52 799 - -
Seca5g01634 803 FunFam Cation/H(+) antiporter 24 70 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01634 Seca-Chr5 49803974 49807334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01634 1 800 Antiporter Super Family AT5G37060 43.690 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01634 K26731 - gmx:100783296 1066.6