Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01629 ATGTTATTGACGGAAAACGGAAATGGAAGCGATTCAGACGCAAATTCGGATGACGCGCCGGAATACTATCAACCGATCTCCGCCGTCGACGACGACGGGATCTCAGACGGAGAGAACGGCGTTGAGTTCCGGCAGCTGCCGAACGGGTACGGCGGAGCAGAGAACGGGATATCGTCCCTGAATCTAAACGACGGCGTAGAGCAGAAGAGCAGCGACGAGGAGGAAGAGGAGGAGGATGAAAGGAGAAGAGAGGAATTGGAGTGGGCGATTCAGAGGGCGTTGAGTGAAGACGAGAACCGGAGGAACGCGCCGCTGACAACGGAGAACGCGACGAGGGTGAGGGAGGCGATGCGCGGCGTGTCTTTCGCCGGAACGGCTCCCGATTGGGCATCACAAGTCCCCGAGGATCGCTGGATTGAACGCCTTCGCAGATTGAGACAATCACCAAATACTTGA 456 0.5702 MLLTENGNGSDSDANSDDAPEYYQPISAVDDDGISDGENGVEFRQLPNGYGGAENGISSLNLNDGVEQKSSDEEEEEEDERRREELEWAIQRALSEDENRRNAPLTTENATRVREAMRGVSFAGTAPDWASQVPEDRWIERLRRLRQSPNT. 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01629 151 Coils Coil 67 96 - -
Seca5g01629 151 PANTHER BNAA08G28800D PROTEIN 4 150 - -
Seca5g01629 151 MobiDBLite consensus disorder prediction 1 84 - -
Seca5g01629 151 MobiDBLite consensus disorder prediction 1 17 - -
Seca5g01629 151 MobiDBLite consensus disorder prediction 52 66 - -
Seca5g01629 151 Pfam Male enhanced antigen 1 (MEA1) 21 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01629 Seca-Chr5 49707514 49708155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01629 3 148 Chloroplast and Mitochondria Gene Families AT1G07020 48.101 8.11e-32 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01629 - - lang:109344979 187.193