Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g01621 | ATGTTTCACTTGAGAAACCATCTCACCCTTTTTCTTCTCTTATCTCTGTTCGGAATCAGATCATTACCCTCCTCAGCATCTCCCGTTTACAACTATAATTACTGTCCAAAAAACACAACCTACGAATCCAGCGAGACATTCCGAACCAATCTCGATGTCTTGTTCTCTTCTCTCGTCTCCACCTCCCAAGCTTACAGTTCCTATTATTCATCCACGGGTCTGGGAACCCAAAACATCGCCAACGGCCAATACATGTGTCGCGGCGATGTCTCCTCTGCCACGTGTCAGGAGTGTGTGACCACAGGAACCAGAGACATAAAACGGCTCTGTCCTAACAAAACAGAGTCCATAATTTGGTACGATGAGTGTCTGGTGGGTTACACAAGCCGCTACTTCGACTACACCGACATCGTTCCTGGAGTGAGTTTGTGGGATGACAAAAACATCTCTGACTCGGATTTGGACAGTTTCAATAGAACGTTGTTTGGTTTGTTAGATAGTTTGGGTGAAGAAGCTGCGAGTTCACAGTCAGGGAAGAAATTTGCCACAGGGGATGCAGAGTTCGCTGCCCCTTTGCGGGTTTATGGGTTGGCGCAGTGCTTGCCGGATATGACGAAGGATCAGTGTGAGAAGTGTTTGCAAAATGCGATTGGAACTCTTACGGCTTGTTGTGGAGGAAAACAGGGTGCTAAGGCTCTGCTTGCGTGGTGTAATATCAGATATCAATTGTATCAGTTTTACAATACCACTGGGACTCCTTCAGTTATTTATGCAGGAAATCAAAAATCTTCATCACGAAAAATTGTCTTGATTGTGGTCTTTGTTGTTATTTCACTAATTCTCTTATGTTGTGTTGGCTATTTCCTACTGAGAAAATCGAGGAAGAATTATAAGACCCTTCTAAGGAAAAATTTTGGGGATGAAAGTGCCACTTTAGAGTCTTTACAATTCAGTTTGACCATAATTGAAGCTGCCACAAAGAAGTTTTCAAGTGAAAACAAAATTGGAGAAGGTGGATTTGGAGAGGTTTATAAGGGTATTCTTTTAGATGGTCAAGAAATAGCTGTTAAAAGACTCTCACAGAAGTCCGGACAAGGTGAAATAGAATTCAAGAATGAGATTGTACTAATAGCCAAACTGCAACATAGAAACCTAGTAACTTTGCTAGGATTTTGCTTGGAAGAACAAGAGAAAATGCTTATTTATGAATTTGTGCCCAATAAGAGCCTTGATTACTTTTTATTTGATCCCCACAAGAGTAGACTATTGAATTGGTCTGAGCGTTACAGAATTATTGAAGGAATTGCAAGAGGAATTCTTTATTTGCATGAGCATTCACGATTGAAAGTTATACATCGTGATCTTAAACCTAGTAATGTACTGTTAGATGAAAGCATGAATCCAAAAATCTCCGACTTTGGTGTTGCAAGGATTGTTGCTATAGATCAAGATCGAGGAAATACAAATAGAATTGTGGGGACATTTGGGTATATGTCTCCAGAGTATGCAATGCATGGACAGTTTTCAGAAAAGTCAGATGTATATAGTTTTGGTGTCATAGTTTTGGAGACAATTAGTGCAAAAAAGAATGCTCGTTCTTTGTTATCTGATGATGATGATGACCTCTTAAGTTATGCTTGGAGACAATGGAGAGATCAAACACCATTAAAAATATTAGATGAAGACATACAAGAATCTTGCAATCATAGTGAAGTCATTAAGTGCATCCAAATTGGTTTATTGTGTGTGCAAGAGAAGGTAGATAATAGACCTACCATGGCAAAAGTTGTTTCATATCTTAGTAGCCCTTTATCTGAGTTGCCGTTTCCTGGAGAACCAACGAATTCTAAGCATAATGGAATAGTTCAAAAGATGGTAGGAGGCGAATCGAGTTCTGGTTCTACATTATCAATGAATGAAATGTCTGTGACTATATCTATTCCTCGATAG | 1950 | 0.3969 | MFHLRNHLTLFLLLSLFGIRSLPSSASPVYNYNYCPKNTTYESSETFRTNLDVLFSSLVSTSQAYSSYYSSTGLGTQNIANGQYMCRGDVSSATCQECVTTGTRDIKRLCPNKTESIIWYDECLVGYTSRYFDYTDIVPGVSLWDDKNISDSDLDSFNRTLFGLLDSLGEEAASSQSGKKFATGDAEFAAPLRVYGLAQCLPDMTKDQCEKCLQNAIGTLTACCGGKQGAKALLAWCNIRYQLYQFYNTTGTPSVIYAGNQKSSSRKIVLIVVFVVISLILLCCVGYFLLRKSRKNYKTLLRKNFGDESATLESLQFSLTIIEAATKKFSSENKIGEGGFGEVYKGILLDGQEIAVKRLSQKSGQGEIEFKNEIVLIAKLQHRNLVTLLGFCLEEQEKMLIYEFVPNKSLDYFLFDPHKSRLLNWSERYRIIEGIARGILYLHEHSRLKVIHRDLKPSNVLLDESMNPKISDFGVARIVAIDQDRGNTNRIVGTFGYMSPEYAMHGQFSEKSDVYSFGVIVLETISAKKNARSLLSDDDDDLLSYAWRQWRDQTPLKILDEDIQESCNHSEVIKCIQIGLLCVQEKVDNRPTMAKVVSYLSSPLSELPFPGEPTNSKHNGIVQKMVGGESSSGSTLSMNEMSVTISIPR. | 650 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g01621 | 649 | ProSiteProfiles | Gnk2-homologous domain profile. | 29 | 132 | IPR002902 | - | |
Seca5g01621 | 649 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 139 | 246 | - | - | |
Seca5g01621 | 649 | FunFam | cysteine-rich receptor-like protein kinase 10 | 405 | 607 | - | - | |
Seca5g01621 | 649 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 450 | 462 | IPR008271 | GO:0004672|GO:0006468 | |
Seca5g01621 | 649 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 21 | 646 | - | - | |
Seca5g01621 | 649 | Gene3D | Transferase(Phosphotransferase) domain 1 | 405 | 607 | - | - | |
Seca5g01621 | 649 | ProSiteProfiles | Gnk2-homologous domain profile. | 137 | 246 | IPR002902 | - | |
Seca5g01621 | 649 | ProSitePatterns | Protein kinases ATP-binding region signature. | 335 | 357 | IPR017441 | GO:0005524 | |
Seca5g01621 | 649 | ProSiteProfiles | Protein kinase domain profile. | 329 | 605 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g01621 | 649 | CDD | STKc_IRAK | 335 | 600 | - | - | |
Seca5g01621 | 649 | Gene3D | - | 141 | 246 | IPR038408 | - | |
Seca5g01621 | 649 | Gene3D | - | 28 | 132 | IPR038408 | - | |
Seca5g01621 | 649 | SUPERFAMILY | Protein kinase-like (PK-like) | 313 | 612 | IPR011009 | - | |
Seca5g01621 | 649 | Gene3D | Phosphorylase Kinase; domain 1 | 292 | 404 | - | - | |
Seca5g01621 | 649 | Pfam | Protein tyrosine and serine/threonine kinase | 332 | 600 | IPR001245 | GO:0004672|GO:0006468 | |
Seca5g01621 | 649 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 | 290 | 404 | - | - | |
Seca5g01621 | 649 | SMART | serkin_6 | 329 | 600 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g01621 | 649 | Pfam | Salt stress response/antifungal | 154 | 243 | IPR002902 | - | |
Seca5g01621 | 649 | Pfam | Salt stress response/antifungal | 35 | 128 | IPR002902 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g01621 | Seca-Chr5 | 49537732 | 49542202 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g01621 | 4 | 649 | Receptor kinase-like Gene Family | AT4G05200 | 43.172 | 0.0 | 563 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca5g01621 | Pkinase | 5.3e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g01621 | - | - | gsj:114402923 | 876.7 |