Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g01618 | ATGAACATGGAATGCTACTTAGCCACCAAATGTCACGTCTTGCTTTATCTGGCGTTCCATTTTTCCCTTCTCAAATATTCCTATTCCTCAGAGGCCTTACATCTCTACCGTTGCTCATCCACCAAAACATTCACAGCCAATAGCCCTTTCCAGTTCAACCTGGACACTCTTCTAGCATCTCTCTCTTCCGTCGTCACTAATAATAAGGAGTTCAACTTCTACAACACCACAGCCGGTGGCAGAAACTCCCTTGACACCGTCTACGGCCTTTACATGTGCCGTGGCGACGTACCCTACGAGGTGTGTCGAGATTGCGTAGTAAAAGGAACCCCAAAACTAGCCTCAGTGTGCGAGTTCGTGAAAGAAGGTATAATATGGTATAACGAGTGCTTCATTCGTTATTCCAATCGCTCTTTCTTCTCCTCAATAGATGAACAGCCTAGAATCGGCATTTTTAACACAATGAACATAACAACCACAAAAAGTAGCAACAACACAGGCTTCACTTGGACACTGGCAAACACGTTGAGCCAAGTGGTGTCCGAGGCAGCCAATAGTAGCAACAAGTTTGCAACGAAAAAAGTGGCGATTTCGATTGCTGAGTCTGACGCGCTTTACAGTCTTGCTGAATGCACGCCGGATCTGTCGCCACAAGATTGCGACACGTGTCTGCGTGATGCAATGAGTGATGTGCCGTGGTGTTGTATGGGAAAGGCTGGGGGAAGAGTTGTGTATCCTAGCTGCTCACTAAGGTTTGAATTGTACCAGTTTTACTGGGATACAACGGAAACTTATGTGGCAAAGTCGCCTCTTCAAGGCACCCCTTTTAGCTCAGGAGTCACAGAAAATGGAAAAAGAAGTTCGCGAACAGTTATTTTTGTTGTTGCCCCTTTTGTTGTTTCGGTGACACTCTTTGCTTTTTGCTCCTACTATTTGCTAAGGAGAAAGGCAAGAAAAAGCAGCTGTGAGACTCTTCTAAAAGAAAACTTTGGTCGTGAAATTTCAACTTTGGAAGGGTTGCAATTCAATTTGGCTATAATTGAAGCATCAACCAACAATTTTTCACTTGAGAATAGAATCGGTAAAGGTGGATTTGGAGAAGTTTACAAGGGCATTCTTTCTGATGGACGACATATAGCTGTAAAAAGACTTTCAACAAGCTCTAAGCAAGGTTCAATTGAATTCAAAAATGAGATTTTACTGATAGCCAAATTACAACATAGAAATCTTGTGGCATTGATAGGTTTTTGCCTAGACGAACAAGAGAAGATTCTTATTTATGAATACATGCAAAATGGGAGCCTCGATAAATTTTTATTTGATACTCAACAATCGAAGTTAAGTTGGTTTGAGCGTTACAAAATTATAGGCGGAATTTCTCTTGGGATTCTTTATTTACATGAATATTCTCGGCTTAAAGTTATACATCGAGATCTTAAACCTAGTAATGTTTTACTAGATGAAAATATGAATCCAAAGATATCGGATTTTGGCATGGCTAGAATTGTTGAAATAGAACAAGATCGTGGAAAAACTAATAGAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGTTTGGACATTTTTCTGAAAAGACGGATGTTTTTAGTTTTGGAGTCATGGTTCTAGAAATTATTACTGGACAAAGAAATGTGAATTCTTATGACTCAGACCATGTTGCAGATGGCCTCATGAGTTATGTTTGGAAACAATGGAATGATCAAACACCACTAAACATATTGGACCCAAATATGAAAGAAAATTATTCTCAAGTTGAAATTATTAAGTGTATTCATATTGGTTTATTATGTGTTCAAGAAAATCAAACCGCTAGACCAACAATGTCAACAGTTGTCTCATATCTTAAGAGTCATTCCCTTGAATTGCCATCTCCACAAGAACCGGCATTTTTCTTGCATGGTAGAATGGATCAAAGAGTTGCTACACATCAACCATCAAGTTTTAGTCAACTTGCCAATTACGCCATGCCATTGTCTGTCAATGAGATGTCTATGAGTAACTTTTATCCAAGATAG | 2046 | 0.3944 | MNMECYLATKCHVLLYLAFHFSLLKYSYSSEALHLYRCSSTKTFTANSPFQFNLDTLLASLSSVVTNNKEFNFYNTTAGGRNSLDTVYGLYMCRGDVPYEVCRDCVVKGTPKLASVCEFVKEGIIWYNECFIRYSNRSFFSSIDEQPRIGIFNTMNITTTKSSNNTGFTWTLANTLSQVVSEAANSSNKFATKKVAISIAESDALYSLAECTPDLSPQDCDTCLRDAMSDVPWCCMGKAGGRVVYPSCSLRFELYQFYWDTTETYVAKSPLQGTPFSSGVTENGKRSSRTVIFVVAPFVVSVTLFAFCSYYLLRRKARKSSCETLLKENFGREISTLEGLQFNLAIIEASTNNFSLENRIGKGGFGEVYKGILSDGRHIAVKRLSTSSKQGSIEFKNEILLIAKLQHRNLVALIGFCLDEQEKILIYEYMQNGSLDKFLFDTQQSKLSWFERYKIIGGISLGILYLHEYSRLKVIHRDLKPSNVLLDENMNPKISDFGMARIVEIEQDRGKTNRIVGTYGYMSPEYAMFGHFSEKTDVFSFGVMVLEIITGQRNVNSYDSDHVADGLMSYVWKQWNDQTPLNILDPNMKENYSQVEIIKCIHIGLLCVQENQTARPTMSTVVSYLKSHSLELPSPQEPAFFLHGRMDQRVATHQPSSFSQLANYAMPLSVNEMSMSNFYPR. | 682 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g01618 | 681 | ProSiteProfiles | Gnk2-homologous domain profile. | 32 | 139 | IPR002902 | - | |
Seca5g01618 | 681 | ProSitePatterns | Protein kinases ATP-binding region signature. | 360 | 382 | IPR017441 | GO:0005524 | |
Seca5g01618 | 681 | Gene3D | Phosphorylase Kinase; domain 1 | 316 | 429 | - | - | |
Seca5g01618 | 681 | SUPERFAMILY | Protein kinase-like (PK-like) | 341 | 657 | IPR011009 | - | |
Seca5g01618 | 681 | FunFam | Cysteine-rich receptor-like protein kinase 25 | 151 | 257 | - | - | |
Seca5g01618 | 681 | ProSiteProfiles | Gnk2-homologous domain profile. | 150 | 257 | IPR002902 | - | |
Seca5g01618 | 681 | Gene3D | - | 31 | 139 | IPR038408 | - | |
Seca5g01618 | 681 | Gene3D | - | 151 | 257 | IPR038408 | - | |
Seca5g01618 | 681 | ProSiteProfiles | Protein kinase domain profile. | 354 | 631 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g01618 | 681 | Pfam | Protein kinase domain | 355 | 622 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g01618 | 681 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 | 31 | 139 | - | - | |
Seca5g01618 | 681 | Pfam | Salt stress response/antifungal | 38 | 136 | IPR002902 | - | |
Seca5g01618 | 681 | Pfam | Salt stress response/antifungal | 160 | 255 | IPR002902 | - | |
Seca5g01618 | 681 | CDD | STKc_IRAK | 360 | 626 | - | - | |
Seca5g01618 | 681 | Gene3D | Transferase(Phosphotransferase) domain 1 | 430 | 634 | - | - | |
Seca5g01618 | 681 | SMART | serkin_6 | 354 | 625 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g01618 | 681 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 34 | 677 | - | - | |
Seca5g01618 | 681 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 | 314 | 429 | - | - | |
Seca5g01618 | 681 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 474 | 486 | IPR008271 | GO:0004672|GO:0006468 | |
Seca5g01618 | 681 | FunFam | cysteine-rich receptor-like protein kinase 10 | 430 | 632 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g01618 | Seca-Chr5 | 49413282 | 49419086 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g01618 | 10 | 681 | Receptor kinase-like Gene Family | AT4G05200 | 45.735 | 0.0 | 580 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca5g01618 | Pkinase | 2.8e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g01618 | - | - | gmx:100792162 | 749.969 |