Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g01614 | ATGGGAGGTTACTCTGCTAATCCCGCCGACTACAAGCTTCTAGAAGAAGTTGGTTATGGCGCCACCGCCACCGTTTACAGGGCGATCTATCTTCCTTTCAACCAACTTGTCGCTATCAAGTGTTTGGATCTCGATCGCTGCAATACCAATAATGATGATATACGTAGGGAGACGCAAACGATGAGTTTGATTGATCATCCCAACGTTGTGAGGGCTTACTGTTCCTTTGCGGTGGAACGGAGTCTTTGGGTGGTTATGCCATTCATGGATGAGGGTTCTTGCTTGCACCTCATGAAGATAGCTTACACTGACGGATTTGAAGAGGACGCAATTGGATCGATCCTCAAAGAAACTCTCAAGGCCTTGGATTATCTTCATCGACAGGGTCATATTCATCGAGATGTCAAGGCTGGTAACATTTTACTTGATAGCAATGGGACTGTGAAGCTTGCTGACTTTGGTGTTTCGGCTTGCATGTTTGACACTGGCGAGAGACAGCGTTCCAGGAATACTTTTGTAGGGACTCCTTGCTGGATGGCTCCAGAGGTACTACAACCGGGAAGTGGTTATAATTCCAAGGCTGATATTTGGTCATTTGGAATTACGGCACTGGAACTGGCTCATGGTCATGCACCATTTTCAAAATATCCCCCAATGAAGGTTCTTCTGATGACCATACAGAATGCCCCTCCTGGACTTGATTATGATCGTGATAAAAAGTTTTCTAAGTCATTTAAGGAAATGGTTGCCATGTGCTTGGTGAAAGATCAAACAAAGAGACCATCAGCAGAGAAGTTACTAAAACTTCCCTTCTTCAAAAATGCTAAACCTCCTGAGCTCTCTGTAAAGAAATTGTTTGCTGACTTACCACCTCTTTGGAATCGTGTAAAAGCCCTCCAGCTTAAAGATGCAGCACAACTAGCACTGAAGAAAATGCCTTCTGCAGAACAAGAAGCAATATCTCAGAGTGAATACCAGCGAGGAGTTAGCGCATGGAACTTTGACATTGATGATTTGAAAGCTCAAGCTTCGTTGATGAGGGATGATGATGATATGGTAGAGATGAGGGAGGAAGATGAAAACAAATTTTTTACCAATTACAAGGCTGGCACAACTGATTCCCAGTCTGGTGCTGGCGAAACGAATTCAGAGAAATTACCACAGGATAAGATCACATCACAAATAGGTGGTATTGACATACAACAGACTGAACAGAGCGAATACTTGAACAAAAAGGAGAAGGTTCTTGAAAGTGATCTCCAGGAACCTGTATTACCCAAAAATATTATTTGGAAGAGAAATGGATCATTTACAGAGGCAACAACATCCACGGTAGACAAAGATATAGGTACAAGCAAGGTTAAAGCTCATTCTGTGAAAAATCGTCAAACCCAAAGTGGGCCGTTGGTGCCTGGCACAGTTCTCAGTTATTCTTCCTCAGAAAGAGGCCGTACATTTGAAAGGTATGCTGTACTTTTATATCATCTCTTCTTGCTTGAGAATGGAAATCAGTTACCAAGTGAGAAAAATAATCGTGAAGTACGACGAGCTCCAAGTTTTAGTGGTCCTTTGATGCTTCCAACTCGAGCTTCAGCAAATAGTTTATCTGCTCCGATAAAGTCTTCTGGAGGATTCAGAGATTCATTGGACGACAAGTCTAAGGCTAATCTAGTGCAAATTAAAGGGCGATTCTCTGTGACGTCAGAAAATTTAGATCTTGTGAAGGATATTCCTTTAAGTTCAGTTTCACGCCGATCTTCACAGGGATCACCGCTGCGGAAATCTGCCAGTGTTGCTGATTGGATGCTGGATTCCAAACAAATGCCAATTGGTCAGGCTCCTAAAGATTCTGCTGTCACTAATTTCTCTGCTTCACTTCTTACGCCTCACCTTCAAAATCTTTCCCAGCAAACATCTATTCAACAGGATCTTATAATGAATCTGTTAAATAGCTTGCAACCTGCTGAAGCAACTGACATTTCTCAGAATGGAAAGTTACCACCACGACCTCGCAGTCCAGAAATCAATGGAAATGTTGATACAGCAGCTTCAGACAGGGAAAGTCTTCTCCTGGCCAAAGTTGCAGAGCTTCAGGCTCGGATGATCAATTTGACCGATGAATTGACTGCTGAGAAGTTAAAATACGTGCAGTTGCAACAACAGCTCCGAGCTCTCTGCAGTCAGGATCAAAACGGGGACGGGAGAGAGGAAGTTGCATGA | 2220 | 0.432 | MGGYSANPADYKLLEEVGYGATATVYRAIYLPFNQLVAIKCLDLDRCNTNNDDIRRETQTMSLIDHPNVVRAYCSFAVERSLWVVMPFMDEGSCLHLMKIAYTDGFEEDAIGSILKETLKALDYLHRQGHIHRDVKAGNILLDSNGTVKLADFGVSACMFDTGERQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPSAEKLLKLPFFKNAKPPELSVKKLFADLPPLWNRVKALQLKDAAQLALKKMPSAEQEAISQSEYQRGVSAWNFDIDDLKAQASLMRDDDDMVEMREEDENKFFTNYKAGTTDSQSGAGETNSEKLPQDKITSQIGGIDIQQTEQSEYLNKKEKVLESDLQEPVLPKNIIWKRNGSFTEATTSTVDKDIGTSKVKAHSVKNRQTQSGPLVPGTVLSYSSSERGRTFERYAVLLYHLFLLENGNQLPSEKNNREVRRAPSFSGPLMLPTRASANSLSAPIKSSGGFRDSLDDKSKANLVQIKGRFSVTSENLDLVKDIPLSSVSRRSSQGSPLRKSASVADWMLDSKQMPIGQAPKDSAVTNFSASLLTPHLQNLSQQTSIQQDLIMNLLNSLQPAEATDISQNGKLPPRPRSPEINGNVDTAASDRESLLLAKVAELQARMINLTDELTAEKLKYVQLQQQLRALCSQDQNGDGREEVA. | 740 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g01614 | 739 | Gene3D | Transferase(Phosphotransferase) domain 1 | 92 | 323 | - | - | |
Seca5g01614 | 739 | MobiDBLite | consensus disorder prediction | 659 | 679 | - | - | |
Seca5g01614 | 739 | Gene3D | Phosphorylase Kinase; domain 1 | 2 | 88 | - | - | |
Seca5g01614 | 739 | ProSiteProfiles | Protein kinase domain profile. | 11 | 272 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g01614 | 739 | SMART | serkin_6 | 11 | 272 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g01614 | 739 | CDD | STKc_OSR1_SPAK | 10 | 272 | - | - | |
Seca5g01614 | 739 | MobiDBLite | consensus disorder prediction | 367 | 391 | - | - | |
Seca5g01614 | 739 | Pfam | Protein kinase domain | 11 | 272 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g01614 | 739 | Coils | Coil | 694 | 721 | - | - | |
Seca5g01614 | 739 | SUPERFAMILY | Protein kinase-like (PK-like) | 10 | 327 | IPR011009 | - | |
Seca5g01614 | 739 | ProSitePatterns | Protein kinases ATP-binding region signature. | 17 | 40 | IPR017441 | GO:0005524 | |
Seca5g01614 | 739 | FunFam | Serine/threonine-protein kinase BLUS1 | 1 | 88 | - | - | |
Seca5g01614 | 739 | PANTHER | SERINE/THREONINE-PROTEIN KINASE FRAY2 | 4 | 712 | IPR047173 | GO:0043539 | |
Seca5g01614 | 739 | FunFam | serine/threonine-protein kinase BLUS1-like isoform X2 | 92 | 322 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g01614 | Seca-Chr5 | 49126200 | 49134019 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g01614 | 3 | 730 | MAP Kinase Kinase Kinase Kinase | AT4G24100 | 64.384 | 0.0 | 916 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | STE_STE20-Fray | Seca5g01614 | Pkinase | 2.3e-60 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g01614 | - | - | gmx:100809903 | 1150.19 |