Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01575 ATGTCGCGGAAGGGTTTGATGGAACAAGACCTTAGCAGGTTTGATGCGACCAAGTTGCATCCACTTTCTCCTGAAGTCATATCTCGGCAGACTACTATTAATGTTGGCACCATTGTCTACGTGGCACATGGAAAGTCATATCAGGTGTTCAAACTCTGCGGTTCAAATGAGCTGGAACGTAACATTACAATCAAGCTTGGCTATGCAAATGCAAAAATATACAAGTGTGAAGATGAACGGTTTCCAAGGCGTATGTGCTACAAGGCTTGTGGAAGTGGAAAGGAAGATAGTCCTATGTGTGATATACCAGGGTGTGAAAACTGCAAGATGTAA 333 0.4324 MSRKGLMEQDLSRFDATKLHPLSPEVISRQTTINVGTIVYVAHGKSYQVFKLCGSNELERNITIKLGYANAKIYKCEDERFPRRMCYKACGSGKEDSPMCDIPGCENCKM. 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01575 110 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 1 107 - -
Seca5g01575 110 Gene3D - 30 109 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01575 Seca-Chr5 47245597 47245929 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01575 4 110 Eukaryotic Initiation Factors Gene Family AT4G18330 70.796 2.43e-51 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01575 K03242 - pvy:116135590 179.489