Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g01557 | ATGCATGACCATCAGAAGAAAGGTTTTCAATTTATTCCGCAAAATATTGCAGGGTCAACACAACCAACACTTATGGAAGCAAAATCTGAAAAAATAGGTGGTTGTGTGATATCTCATACTCCTGGATGTGGGAAAACCTTTCTTGTTATTGCCTTTCTTGTCATGGGGTATACTTCATTTTTATCACTAACAAGAGAGAATTTAAAGTATGAACACAAGAAGTATATGGATAAATCTTTGAGAGAAAGCACTTGGATCCTGATACTCGATGAAGGGCACAATCCTAAAAGCACCATGTCAAGGTTGAGGAAAGGGTTGATGAAAGTAGAGACAAAACTGAGAATATTACTTTCAGGGACATTATTTCAGAATAATTTTGGTGAATACTTCAACACACTTTGCTCGGAAAGGCCGAAGTTTGTTCAAGATGTGATGAAAGAGTTAGATACAAAACAAAATAAGGGAAATGATAAAAATCCAGAGAAAGCAAAACATTTACTTGAGACACGTGCTAGGAAATTCTTCCTAGATGACATTGCTAACAAAATTGACTAA | 555 | 0.355 | MHDHQKKGFQFIPQNIAGSTQPTLMEAKSEKIGGCVISHTPGCGKTFLVIAFLVMGYTSFLSLTRENLKYEHKKYMDKSLRESTWILILDEGHNPKSTMSRLRKGLMKVETKLRILLSGTLFQNNFGEYFNTLCSERPKFVQDVMKELDTKQNKGNDKNPEKAKHLLETRARKFFLDDIANKID. | 185 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g01557 | 184 | Gene3D | - | 57 | 180 | IPR038718 | - | |
Seca5g01557 | 184 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 2 | 141 | IPR027417 | - | |
Seca5g01557 | 184 | PANTHER | SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED | 1 | 53 | IPR044567 | GO:0080188 | |
Seca5g01557 | 184 | Pfam | SNF2-related domain | 67 | 134 | IPR000330 | GO:0005524|GO:0140658 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g01557 | Seca-Chr5 | 46664763 | 46665576 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SNF2 | Seca5g01557 | SNF2_N | 3.1e-07 | CL0023 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g01557 | K10875 | - | rcu:8272097 | 185.652 |