Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01550 ATGGCTTCTTATTTTCAGTGTTTCTGGGGTCTATTTCTCTCATGTTCTCTTTATTTTGTTCAATCAACATCAATTCCTCAAGTCTATATAGTCTATTTGGGGCTCAACCATATTCGTGATCCTGGCCTCACTTATGATTACCACCTTCAACTTCTATCTACTGTCTTTACATGTGAAAAAGATGCAGAACGTTCAATTCTCTATAGCTACAAGCATAGTTTTTCAGGGTTTTCAGCAATGCTCAATGCAAGCCAAGCAGCCACACTAGCCAATATGCAAGAAGTGGTGTCAGTTTTTAGAAGCAAGTCATCAAGGCCACACACAACAAGAAGCTGGGATTTCTTGCACCTTACCTTGGACAATAGTGAAGTGACTCCAATGCAGCTAATTTATGGTGAAGACATCATTGTTGGGGTATTAGACACAGGTGTATGGCCAGAATCTGAAAGTTTCCAGGAAGATCCTAGCATTGGTCCTATTCCATCAACTTGGAAAGGAGAATGTGTTGAGGGAGAGAGATTCGACCCTACAGCAGCATGCAACAACAAGTTAATTGGTGCTCGTTACTACCTGAAAGGTTTTGAACAAGAATATGGACCACTAAATACAACAGAGAATTTTGAGTACCAATCACCTCGAGATTTTGTTGGCCATGGAACACACACAGCTTCAACAGCAGTAGGGTCCATAGTGGAAGATGCAAGTTTCTTTGACATAGGAAAAGGCACTGCCAGGGGTGGTGCTCCAAGGGCTCGTTTGGCTGTTTACAAAGTATGCTGGAACGTGGAATATTATGGAAGGTGTTCAGAAGCAGATATAATGGCAGCTTTTGATGATGCTTTGCATGATGGGGTGCACATTATCTCAGCTTCCTTTGGTCCAATTCCACCACTTGCTCCTTTCTTCAAAGACAGTTCCAGCATTGGTTCGTTCCATGCCATGCAAATGGGTGTAACAGTGGTGTTCTCTGCAGGAAACTATGATGAGTCACCTGAACCATCTCTAGTTGGAAATGTTGAACCATGGTCCATCTGCGTGGCTGCTTCTTCAATTGATAGAACCTTCCCCACAAAAATAACCATTGGTGACAATAATCTTTATATGGGAGAAAGCTTGATTACCACACAGATAAATGCAAAATTGGCTGATGCAAGGAGATATTTTTACAATGGGATATGTGAGGTGGACTATATTATTAAGCCATCAAAACCAGGAGAAGGGAAGATTGTGCTCTGCTTCTCTACAATTGGACCAAAATCAAGTCTGGAAGCAGCAAAAGCAGTGAAGGAAGTGAATGCAACAGGATTGATCTTTGTGGAACCTATGACAAGGCAATTACCTGATGTTAGTGTTGTTCCCACAGTCCTTGTCAATTTGGAAGAAGGGACTAAAATTAAGCATTTTCTTGCTGAATCTCCCAGGTATAATCATTGCCATAAGATGGAAGTACTTATTTTGTTTTTCTTTCTTCATTATCCTGTTGGATAA 1488 0.4113 MASYFQCFWGLFLSCSLYFVQSTSIPQVYIVYLGLNHIRDPGLTYDYHLQLLSTVFTCEKDAERSILYSYKHSFSGFSAMLNASQAATLANMQEVVSVFRSKSSRPHTTRSWDFLHLTLDNSEVTPMQLIYGEDIIVGVLDTGVWPESESFQEDPSIGPIPSTWKGECVEGERFDPTAACNNKLIGARYYLKGFEQEYGPLNTTENFEYQSPRDFVGHGTHTASTAVGSIVEDASFFDIGKGTARGGAPRARLAVYKVCWNVEYYGRCSEADIMAAFDDALHDGVHIISASFGPIPPLAPFFKDSSSIGSFHAMQMGVTVVFSAGNYDESPEPSLVGNVEPWSICVAASSIDRTFPTKITIGDNNLYMGESLITTQINAKLADARRYFYNGICEVDYIIKPSKPGEGKIVLCFSTIGPKSSLEAAKAVKEVNATGLIFVEPMTRQLPDVSVVPTVLVNLEEGTKIKHFLAESPRYNHCHKMEVLILFFFLHYPVG. 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01550 495 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 107 IPR037045 -
Seca5g01550 495 Gene3D - 352 472 - -
Seca5g01550 495 Pfam Peptidase inhibitor I9 28 104 IPR010259 -
Seca5g01550 495 CDD PA_subtilisin_like 359 473 - -
Seca5g01550 495 Gene3D Peptidase S8/S53 domain 134 351 IPR036852 GO:0004252|GO:0006508
Seca5g01550 495 CDD Peptidases_S8_3 106 351 IPR034197 -
Seca5g01550 495 Pfam Subtilase family 132 424 IPR000209 GO:0006508|GO:0008236
Seca5g01550 495 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 61 473 IPR045051 -
Seca5g01550 495 FunFam Subtilisin-like protease SBT5.3 19 107 - -
Seca5g01550 495 SUPERFAMILY Subtilisin-like 107 374 IPR036852 GO:0004252|GO:0006508
Seca5g01550 495 ProSiteProfiles Serine proteases, subtilase domain profile. 111 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01550 Seca-Chr5 46307985 46314098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01550 58 473 Subtilisin-like Serine Gene Family AT4G26330 56.295 3.65e-161 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01550 - - jre:109002178 651.744