Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01495 ATGAGTTTAAATGCAAGTGACTCTTTGTACCACTCAATTACAAAATTGAATGCAACCAGCTACCAAGTTTGTTATGCTGCTCCACCCCATATTGTTTCAGATGGCTTATGGGGAGGCCATAAAAATGGCAGGACTCCAATGAAATCATTCTTCCCCATATTTGAGTTACAGATCCTTATAATTTTTGCTATCACCCAAATCTTCCGTTTCATCCTCAAGCCCTTGAGAGTCCCTCTATTTATTTCACAAATGATGGCTGGCCTAATTATAGGTACTTCATTTGAGATAGAGGGACTGGGCACATACATGAAGATGTTGTTCCCTTATGGAACTCAAGACATCATTTCAACAATATCATCACTTGGTTTAACACTCTTCATTTTTATAAATGGTGTGCAAATGGATTTTAGCATGATAACAAGAACAGGAAACAGGGCATGGGCTATTTCCATAATTGGATTGGTAATACCAATATTTATTGGTTTTACACTACCAGCCTTGCTCTCTGATAAATTAGACACAAACCATGTCAGTGATATGTATATTTCATTGGTATCACACACAATAAGTTCATTTGCTGTCATTGCTTCCCTCCTCAATGAGCTTTGCATCCAAAACTCTGAGCTTGGGAGATTGGCATTGTCCTCAGCATTGGTGAGTGATGTTTTGAGCACATTTGTTGCATCCGTTGGTGTTGCTTTAGTGAGCGTTGACATGAAAGTGATTACAAGAAACTTGTTCTCATTGTTTTCCTTCGCTGCCCTTATTCCATTAATCTGTCGACCAGCAATGTTTTGGATCATCAAACGCACCCCAGAAGGAAGACCTGTGAAGGATGTTTACATTTATGTTATCATAGCAATGGTCTTTGGTTTAGGCTTTGTTGCAGTTGAGATAAATCAAGAATTTGTCTTGGGAGCTTTCATTTTGGGACTTTCTGTGCCAGAAGGACCTCCATTAGGATCTGCATTGGTTAAGAAGCTTCAGTTCTTTGGTACCTCATTCTTTTTGCCAATCTATGTGACTACATGTGTGTTGAGGACAGATTTTTCCCTGGTTTATTCATCATCAATGGTTTTGATCATTGTTTTGATAGTCCTTTTTACTCACTTGGTCAAAATAATAGCATGCTTTCTACCTCTCTTCTTTTGCAACATGCCCACCACTGATGCTTTGTCAGTTGCCCTCATTTTGAACACCAAAGGAGTAGTGGAAATTGGCCTCTACTGTGCCTTATACGACAGTAATCTGATCAGTGGCCAATTATATGGATTAATGATGATCAGTGTAGTGGTGATAGCATGCATTGTGCAATGGTCAGTGAAGTTTTTGTATGATCCTTCAAGAAAATATGCTAGCTACCACAGAAGGAACATTATGAGTTTAAGACCCCACTCTGAGCTGAGAATACTTGTATCCATTCATAAACCAAACCATATTGGTCCCATGATAGATTTCCTTGACCTCTGTTATCCAACAACAGAACACCCTATCACTGTGGATGTAGTGCATCTAATTGAGCTAGTTGGAAGAACCTTGCCCCTTTTCATTCCCCATTGCCTTCACAGACAAGTATCAGGCTCTCAAAGATCATACTCAGATGATGTCATTCTTGCTTTCAACATTTTTGAACATGACAATCAACATGCAGCAACAATAAACACTTACACAGCAATATCTCCAACTCACCTCATGTATGAAGATGTTTGCCATCTAGCATTGGACAAAGTTGCATCCATAATAATTCTTCCCTTTCATCAAAGATGGTCTAGTGATGGTGCTGTCTTATCTGATGACAAGAACATAAAGACACTAAATCGTAAGGTCCTAGAAATAGCTCCATGCTCTGTTGGAATCCTTGTAGCTCGTGGTTCCCAATCAAGTACAATAGGCTCAACCACTAGATTAGCCATAATTTATTTGGGTGGAGAAGATGATGAAGAGGTTTTGTGCTTAACAAAAAGAGCAACAAGGAACCCTGAGATTGACATAGTTATTTACCACCTTATTTGTAAGGATTACATAGCAGAATTGGAGGACCTAATGGTAGTGGGTCATGATGTGTTACAAGATGTGAAGCATGCACATAATGTAAGGTATCAAGAAATATTTACAAAGGATGGATCAGACACAGTTGCTTTTCTGAGGGACATAGTGAATGATCATGATTTTTTCATAGTTGGGAGAAGGCATGGGATAAACTCACCTCAAACTGATGGACTTACACATTGGAGTGAGTTTCCAGAATTAGGTGTCATTGGTGATTTTCTTTCTTCACCAGATTTCAAGAGCCATGCATCTATTTTGGTGGTGCAGCAACAACTCGCACGCAAGGCACGTCGTCAAGGGTGGAAGTTTTAG 2361 0.3935 MSLNASDSLYHSITKLNATSYQVCYAAPPHIVSDGLWGGHKNGRTPMKSFFPIFELQILIIFAITQIFRFILKPLRVPLFISQMMAGLIIGTSFEIEGLGTYMKMLFPYGTQDIISTISSLGLTLFIFINGVQMDFSMITRTGNRAWAISIIGLVIPIFIGFTLPALLSDKLDTNHVSDMYISLVSHTISSFAVIASLLNELCIQNSELGRLALSSALVSDVLSTFVASVGVALVSVDMKVITRNLFSLFSFAALIPLICRPAMFWIIKRTPEGRPVKDVYIYVIIAMVFGLGFVAVEINQEFVLGAFILGLSVPEGPPLGSALVKKLQFFGTSFFLPIYVTTCVLRTDFSLVYSSSMVLIIVLIVLFTHLVKIIACFLPLFFCNMPTTDALSVALILNTKGVVEIGLYCALYDSNLISGQLYGLMMISVVVIACIVQWSVKFLYDPSRKYASYHRRNIMSLRPHSELRILVSIHKPNHIGPMIDFLDLCYPTTEHPITVDVVHLIELVGRTLPLFIPHCLHRQVSGSQRSYSDDVILAFNIFEHDNQHAATINTYTAISPTHLMYEDVCHLALDKVASIIILPFHQRWSSDGAVLSDDKNIKTLNRKVLEIAPCSVGILVARGSQSSTIGSTTRLAIIYLGGEDDEEVLCLTKRATRNPEIDIVIYHLICKDYIAELEDLMVVGHDVLQDVKHAHNVRYQEIFTKDGSDTVAFLRDIVNDHDFFIVGRRHGINSPQTDGLTHWSEFPELGVIGDFLSSPDFKSHASILVVQQQLARKARRQGWKF. 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01495 786 Gene3D - 54 453 IPR038770 -
Seca5g01495 786 PANTHER CATION/H + ANTIPORTER 23 774 - -
Seca5g01495 786 Pfam Sodium/hydrogen exchanger family 59 438 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01495 Seca-Chr5 44341921 44345032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01495 23 774 Antiporter Super Family AT5G22900 36.149 1.04e-154 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01495 K26731 - gmx:100785062 1002.66