Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01452 ATGGTAGAAAGATGCGGGATTGGGTATGAAGAGCATAATGAGTGGTATTTCATTAGCCACAAAGATAAGAAGTATCCAAGAGGGATAAGAACTAACAGAGCTGCAATGGTTAGGTTCTGGAAGGCAATAGAAAGAGATAAGGCAATGTATGATAAGATGAAACTAATTAGGATGAGGAAGACCCTTGTTTAA 192 0.3802 MVERCGIGYEEHNEWYFISHKDKKYPRGIRTNRAAMVRFWKAIERDKAMYDKMKLIRMRKTLV. 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01452 63 Gene3D NAC domain 1 63 IPR036093 GO:0003677|GO:0006355
Seca5g01452 63 SUPERFAMILY NAC domain 9 63 IPR036093 GO:0003677|GO:0006355
Seca5g01452 63 Pfam No apical meristem (NAM) protein 11 63 IPR003441 GO:0003677|GO:0006355
Seca5g01452 63 ProSiteProfiles NAC domain profile. 1 63 IPR003441 GO:0003677|GO:0006355
Seca5g01452 63 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01452 Seca-Chr5 43269539 43269730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01452 1 63 NAC Transcription Factor Family AT2G18060 74.603 9.50e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01452 - - ming:122083745 106.686