Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g01445 | ATGGCTGAACCAAAATTAAAATTGAAAACCCTAGTTTCTCTCTCTAGGCTCTTGTTCTGTCTCTCTCTCCTCTGCTCCACCGCCATTGCCGACGATGGCGCGTTCATGTCGAAGCTCGCGAAAGCCCTGAGTCCAACTCCGTCAGGGTGGTCGACGACCGGTGGCGGCGGTTTCTGTAACTGGAAAGGCGTGAAATGCGACGGATCGAACAGTGTGACCTCGATTGACTTGCATTCCATGTCACTCAGTGGAACACTACCTTCCGATCTGAACTCGCTCTCTCAACTCACCTCCCTCTCTCTCCAGGGAAACTCTCTCCACGGTGCGATACCTTCCTTGGCGAATCTCACAAATCTCCAAACCGTGTTTCTCGACGGTAACAACTTCACCTCTGTTCCCGATGGTTGCTTCCAAGGGCTGAATAGTTTGCAGAAACTTAGCATGACAGACAGCATCAACCTCGCTCCATGGACGATTCCCACCGAGTTGACTCAGTCCACCAACCTCGTTGAGCTTGACCTCGGAAACACAAACCTCATTGGCACCGTGCCGGATATTTTCGGTCCTTTGGTCAGTTTGCAGGGCCTTCGTCTCTCCTACAACAACCTCACCGGGGATTTGCCCAAATCCTTCGCTGGATCTGGGATTCAGAATTTGTGGCTCAACAATCAGAAAGATGGGTATGGTTTTACTGGTTCCATTGACATGCTTGCTTCCATGACTCACTTATCTCAGGTGTGGCTCCAGAAGAACAAGTTCACTGGTCCCATTCCTGATTTGTCAAACTGCACCGGTTTGTTTGATCTGCAGCTTCGTGACAATCAATTAACTGGTGTGGTTCCACCTTCTTTGATGACTCTCTCTAGCTTGCAGAACGTTTCCTTGGACAACAACAGGTTGCAGGGTCCTTTTCCCTCGTTTGGGAAAGGGGTGAAGGTCGACCCTCTTAAAGGGATCAATAGCTTTTGTCAAAACACTCCTGGACCTTGCGATTCGAGGGTCACGACATTGCTTGATATTGCCAAAGATTTTGGGTACCCTCTTCAGTTGGCCACTTCCTGGACAGGGAACGATCCTTGTAATGATTGGAGCTTCATTGTGTGTTCTGGAGGGAAGATTATTACGGTGAATTTAGTAAAGCAGAATTTGACGGGAACAATTTCACCTGCATTTTCCAATTTAACTGATTTGAGGAACCTGCATCTGAATGATAACGATTTGAGTGGTTCGATACCTGAGAGCTTGACTAATTTGGCTCAACTTGAGGTTCTGGATGTGACTAATAACAACCTATCTGGTGAGGTTCCCAAATTCTCAGCTAAGGTGAATTTCAAATCTGCAGGGAATGTTTTGCTTGGGCGTTCTGGGGGTGGTGGAGGCGGTGGAACCACTCCATCATCGGGTTCTGGTGATGCACCCAGTGGAAGTCCTTCTGCAAATGCAAGTGGTTCTTCGCTCTCACCTGCTTGGATCGCAGGTATAGCCATTATTGCTGTATTTTTCGTTGCAGTGGTGTTGTTTGTCTTTTGTAAGTGTTATGCCAAAAACCGCCGGCATGGGAAGTTCGGAAGGGTTAATAATCCTGAAAATGGAAAAGGAGAAGTTAAAATTGATATGATGAGTGTTTCCAATTCCAATGGATATGGTGGAGTTCCAAGCGAGATACAGAGCCAGGGCAGTGAGCGCAGTGACATTCCTGTTTTTGAGGGTGGAAATGTTACAATTTCAATCCAAGTTCTTAGGCAAGTAACCGATAATTTTAGTGAAGATAACATTTTGGGTAGGGGAGGATTTGGGGTTGTTTATAAAGGGGAATTGCATGATGGGACTAAAATTGCAGTGAAGAGGATGGAATCTGTTGCAGTGGGAACTAAAGGAATGAATGAATTTCAAGCAGAGATTGCAGTTCTAAGTAAAGTTAGGCATAGACATTTGGTTGCTCTTTTAGGATATTGCATAAATGGCAATGAAAGGCTTTTGGTGTATGAGTACATGCCTCAAGGAACATTAACACAACATTTGTTTGATTGGCGTGAAAATGGATGTGCTCCTTTGACTTGGAAACAAAGGGTTGCAATAGCTTTGGATGTAGCAAGGGGAGTGGAATACCTGCACAGCTTAGCTCAGCAAAGTTTCATTCACAGGGACTTAAAACCCTCAAACATACTATTGGGTGATGACATGAGAGCAAAGGTTGCAGATTTTGGATTGGTAAAAAATGCACCAGATGGAAAGTATTCTGTCGAGACACGGTTGGCTGGAACATTTGGTTATCTGGCACCTGAATATGCAGCTACTGGAAGAGTAACAACCAAAGTAGATGTTTACGCATTTGGAGTAGTTCTGATGGAGCTGATTACAGGTAGAAGGGCATTGGACGATACTATGCCTGACGAAAGGTCTCACTTGGTTTCATGGTTCCGTAGGGTACTAATTAACAAGGAGAACATCCCTAAGGCAATTGATCAAACACTCAACCCTGATGAGGAAACCATGGAGAGCATATATAAAGTGGCTGAGCTGGCAGGCCATTGCACTGCTCGTGAACCATACCAAAGGCCAGATATGGGGCATGCAGTGAATGTCTTGGTTCCTATGGTAGAGCAATGGAAGCCTACCAGCCATGAAGAAGAAGAAGGTTATGGCATTGACCTTCACATGAGCCTTCCTCAAGCTCTGCGAAGATGGCAAGCCAATGAAGGCACTTCCACAATGTTTAATGACATGTCCTTCTCACAAACCCAATCAAGCATTCCCGCAAAACCTTCAGGATTTGCTGACTCCTTTGATTCAATGGATTGCCGGTAA | 2808 | 0.4573 | MAEPKLKLKTLVSLSRLLFCLSLLCSTAIADDGAFMSKLAKALSPTPSGWSTTGGGGFCNWKGVKCDGSNSVTSIDLHSMSLSGTLPSDLNSLSQLTSLSLQGNSLHGAIPSLANLTNLQTVFLDGNNFTSVPDGCFQGLNSLQKLSMTDSINLAPWTIPTELTQSTNLVELDLGNTNLIGTVPDIFGPLVSLQGLRLSYNNLTGDLPKSFAGSGIQNLWLNNQKDGYGFTGSIDMLASMTHLSQVWLQKNKFTGPIPDLSNCTGLFDLQLRDNQLTGVVPPSLMTLSSLQNVSLDNNRLQGPFPSFGKGVKVDPLKGINSFCQNTPGPCDSRVTTLLDIAKDFGYPLQLATSWTGNDPCNDWSFIVCSGGKIITVNLVKQNLTGTISPAFSNLTDLRNLHLNDNDLSGSIPESLTNLAQLEVLDVTNNNLSGEVPKFSAKVNFKSAGNVLLGRSGGGGGGGTTPSSGSGDAPSGSPSANASGSSLSPAWIAGIAIIAVFFVAVVLFVFCKCYAKNRRHGKFGRVNNPENGKGEVKIDMMSVSNSNGYGGVPSEIQSQGSERSDIPVFEGGNVTISIQVLRQVTDNFSEDNILGRGGFGVVYKGELHDGTKIAVKRMESVAVGTKGMNEFQAEIAVLSKVRHRHLVALLGYCINGNERLLVYEYMPQGTLTQHLFDWRENGCAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRRALDDTMPDERSHLVSWFRRVLINKENIPKAIDQTLNPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPMVEQWKPTSHEEEEGYGIDLHMSLPQALRRWQANEGTSTMFNDMSFSQTQSSIPAKPSGFADSFDSMDCR. | 936 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g01445 | 935 | FunFam | Receptor-like kinase TMK4 | 30 | 328 | - | - | |
Seca5g01445 | 935 | FunFam | Leucine-rich repeat receptor-like kinase | 332 | 455 | - | - | |
Seca5g01445 | 935 | Pfam | Protein tyrosine and serine/threonine kinase | 590 | 861 | IPR001245 | GO:0004672|GO:0006468 | |
Seca5g01445 | 935 | FunFam | receptor protein kinase TMK1 | 551 | 664 | - | - | |
Seca5g01445 | 935 | MobiDBLite | consensus disorder prediction | 913 | 935 | - | - | |
Seca5g01445 | 935 | MobiDBLite | consensus disorder prediction | 455 | 480 | - | - | |
Seca5g01445 | 935 | Gene3D | Ribonuclease Inhibitor | 31 | 330 | IPR032675 | - | |
Seca5g01445 | 935 | Gene3D | Ribonuclease Inhibitor | 331 | 455 | IPR032675 | - | |
Seca5g01445 | 935 | SMART | LRR_typ_2 | 116 | 139 | IPR003591 | - | |
Seca5g01445 | 935 | SMART | LRR_typ_2 | 190 | 213 | IPR003591 | - | |
Seca5g01445 | 935 | SMART | LRR_typ_2 | 394 | 418 | IPR003591 | - | |
Seca5g01445 | 935 | ProSiteProfiles | Protein kinase domain profile. | 587 | 867 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g01445 | 935 | Pfam | Leucine rich repeat N-terminal domain | 34 | 67 | IPR013210 | - | |
Seca5g01445 | 935 | Pfam | Leucine rich repeat N-terminal domain | 334 | 369 | IPR013210 | - | |
Seca5g01445 | 935 | FunFam | receptor protein kinase TMK1 | 665 | 882 | - | - | |
Seca5g01445 | 935 | SMART | serkin_6 | 587 | 867 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g01445 | 935 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 712 | 724 | IPR008271 | GO:0004672|GO:0006468 | |
Seca5g01445 | 935 | SUPERFAMILY | Protein kinase-like (PK-like) | 563 | 863 | IPR011009 | - | |
Seca5g01445 | 935 | SUPERFAMILY | L domain-like | 60 | 440 | - | - | |
Seca5g01445 | 935 | CDD | STKc_IRAK | 593 | 863 | - | - | |
Seca5g01445 | 935 | ProSitePatterns | Protein kinases ATP-binding region signature. | 593 | 615 | IPR017441 | GO:0005524 | |
Seca5g01445 | 935 | Gene3D | Transferase(Phosphotransferase) domain 1 | 665 | 886 | - | - | |
Seca5g01445 | 935 | PANTHER | OSJNBA0070M12.3 PROTEIN | 17 | 935 | - | - | |
Seca5g01445 | 935 | Gene3D | Phosphorylase Kinase; domain 1 | 550 | 664 | - | - | |
Seca5g01445 | 935 | MobiDBLite | consensus disorder prediction | 460 | 480 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g01445 | Seca-Chr5 | 43033012 | 43037325 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g01445 | 68 | 863 | Receptor kinase-like Gene Family | AT5G07280 | 32.262 | 5.27e-97 | 329 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-IX | Seca5g01445 | PK_Tyr_Ser-Thr | 1.3e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g01445 | - | - | gmx:100781851 | 1467.6 |