Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01444 ATGGGTGAATCAGGCTTTCTACAGACACCGGAAAATGCGGGGCAAGGAAACTCACCAAACAAGACCTCTTTTAAGGTTTATAAATCATGGTCCTTTGGAAGATCATTGGATATTACTAAATTCTGCAACTACCATGAGTTGCGCATTGAGCTCACTCGAATGTTTGGCCTTGAAGGCGAGTTGGAGGACCTTCTGGATCAAGCTGACAGCTTGCAATTTGTGAATAGTGTATATATGGTGCATCAAGATACTTTCGCCTCAGGAAGTGCAACAAATGGGCAACATCAGCCTCGAGCTTTTGAACTCGATTCCAATTCAAAGGCTCTTTAA 330 0.4303 MGESGFLQTPENAGQGNSPNKTSFKVYKSWSFGRSLDITKFCNYHELRIELTRMFGLEGELEDLLDQADSLQFVNSVYMVHQDTFASGSATNGQHQPRAFELDSNSKAL. 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01444 109 Gene3D - 17 87 - -
Seca5g01444 109 MobiDBLite consensus disorder prediction 88 109 - -
Seca5g01444 109 MobiDBLite consensus disorder prediction 8 22 - -
Seca5g01444 109 MobiDBLite consensus disorder prediction 1 22 - -
Seca5g01444 109 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 15 75 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01444 Seca-Chr5 42990811 42992391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01444 1 86 B3 DNA Binding Superfamily AT1G30330 55.056 6.78e-23 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01444 - - psat:127108416 96.6709