Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01437 ATGGAATTTAACAAGGTCTTTATGGATGGTTGTTCTACAATTTGGAGTGATGAAAATTCTGAGAGCAACCGAGAGCAGTCACCTAATGGGGATGGAAACCCGGTGGGAGACGAAGGTGGGCTGACATGGGGCGGGAGGATGATACATGAACTAACACATGATGACATTAAACGTCTGGAGTTCGCTTCTGAGGTGTGTAATAAGGAAGGAACAAGGGAGAAGAAACACTTGGAGAGAAAGGACAGAGTGAGGGAGGCGAGGCCAATTACTCGTGTGCAGTGCAGAGCAAGGATCCGTGTTTACTTAGACATGAGGAGTGGGAAATGGAAGGTGTATGCATTCGACGACCATCATAACCATGAATTAAATCCTCCAACGTATGTTCACATGATGCCAGCTTATAGACGATTGAGTGAATTTGATAAAGCTCAAATTGATACCCTGCATGCAGCCGGTGTGAGAACTTACCATATTATGAGTTTTATAATTGGACAGAAAGGGGGACATGGTGAATTAGGTTTCTGTAAAAAGGACATGTATAACCACATTGATAAACAGAAGAGGGCTAAGATAGAGGATGGTGATGCATTTGCAGGGAAAGTATAA 606 0.434 MEFNKVFMDGCSTIWSDENSESNREQSPNGDGNPVGDEGGLTWGGRMIHELTHDDIKRLEFASEVCNKEGTREKKHLERKDRVREARPITRVQCRARIRVYLDMRSGKWKVYAFDDHHNHELNPPTYVHMMPAYRRLSEFDKAQIDTLHAAGVRTYHIMSFIIGQKGGHGELGFCKKDMYNHIDKQKRAKIEDGDAFAGKV. 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01437 201 PANTHER OS01G0519700 PROTEIN 61 198 - -
Seca5g01437 201 MobiDBLite consensus disorder prediction 16 30 - -
Seca5g01437 201 Pfam FAR1 DNA-binding domain 63 124 IPR004330 -
Seca5g01437 201 MobiDBLite consensus disorder prediction 16 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01437 Seca-Chr5 42809071 42809784 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca5g01437 FAR1 8.5e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01437 - - adu:107460413 183.341