Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01365 ATGGGCCTTGCTTTTCTGCATGAGGAAGCTATAAATCCATTGATTTATCGAGACTTCAAAACCTCTAAAATCCTAATGGATTCGGACTATAGTGCGAAACTTTCTAATTTGTGGCTAGTGAAAGATGCCCCAGTGGGTGACGCGACTCATGTGTCAACTAGAGTGACGAGAACTCAAGGGCACACAGTCCATGAGTATACGATGACAAGGTACTTGAGTTGGAAGATGAATGTGTATAGCTTTGGTGTGGTGTTGCTTAAGATAATGACGGGGAGAAGGGAAATGAATAGGAAGAGGCCTGTAGCGGAGCATAAAATGGTCGAATTGGCAAGGCCTCAAATAAAACATGGAGGAAGAACACAACTCCACCAATGGGTAGATCCAAAGCTTGAAGGTCACTATTTAACTAGAGGAGCACACAGGTAA 426 0.4343 MGLAFLHEEAINPLIYRDFKTSKILMDSDYSAKLSNLWLVKDAPVGDATHVSTRVTRTQGHTVHEYTMTRYLSWKMNVYSFGVVLLKIMTGRREMNRKRPVAEHKMVELARPQIKHGGRTQLHQWVDPKLEGHYLTRGAHR. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01365 141 ProSiteProfiles Protein kinase domain profile. 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca5g01365 141 Gene3D Transferase(Phosphotransferase) domain 1 1 140 - -
Seca5g01365 141 PANTHER OS01G0588500 PROTEIN-RELATED 2 140 - -
Seca5g01365 141 SUPERFAMILY Protein kinase-like (PK-like) 2 102 IPR011009 -
Seca5g01365 141 Pfam Protein kinase domain 2 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01365 Seca-Chr5 41354968 41357218 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01365 1 134 Glycoside Hydrolase AT3G07070 47.015 8.93e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Seca5g01365 Pkinase 6.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01365 - - cann:107878268 168.703