Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01353 ATGGGAACTAAAAGGTATGCAGTCCATGACTTTGGGGTAGTATTGCTTAAGATAATGACAGGGAAAAGTGCAACGGATAGGAAGAGGCCTGTAGCGCAGCATAACCTGGTGGAATGGGCAAGGCCTCAAATAAAGCATGGAAGAAGAGCACTATCCCACCAATTGATAGATCCAAATCTTGAAGTTCACTCTTCAACCAGAAGAGCACACAAGGCAGTGTGGTTGGCATATTAG 234 0.4487 MGTKRYAVHDFGVVLLKIMTGKSATDRKRPVAQHNLVEWARPQIKHGRRALSHQLIDPNLEVHSSTRRAHKAVWLAY. 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01353 77 PANTHER OS01G0588500 PROTEIN-RELATED 4 77 - -
Seca5g01353 77 Gene3D Transferase(Phosphotransferase) domain 1 3 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01353 Seca-Chr5 41298926 41299205 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01353 3 60 Strubbelig Receptor Gene Family AT3G13065 39.655 3.93e-10 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01353 - - dct:110114816 79.7221