Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01340 ATGAGGCCTGTAGCAGAGCATACCCTGGTTGAATGGGAAAGACCTCAAATAAAGCATGGAGGAAGAACACAATTCCACCAATTGATAGATCAAAAGCTTGAAGGTCACTATTCAAGCAGAGGAGCATACAGGGCAATGAGGTTGGCCAATCAGTGCCTTTCAAGAGATCCCAAATCACGACCACTCATGAGTCAGGTCGTTTAG 204 0.4559 MRPVAEHTLVEWERPQIKHGGRTQFHQLIDQKLEGHYSSRGAYRAMRLANQCLSRDPKSRPLMSQVV. 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01340 67 PANTHER OS01G0588500 PROTEIN-RELATED 2 67 - -
Seca5g01340 67 Gene3D Transferase(Phosphotransferase) domain 1 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01340 Seca-Chr5 41247651 41247981 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01340 2 66 Trihelix Transcription Factor Family AT1G68690 37.879 2.04e-09 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01340 - - dct:110114816 90.1225