Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g01332 | ATGGGCCTTGCTTTTCTGCATGAGGAAGCTAAAAATCCATTGATATATCGAGACTTCAAAATCCCTAAAATCCTAATGGATTCGGACTATAGTGCGAAACTTTCTAATTTTTGGCTGGTAAAAGATGCCCCAGTGGGTGACTTGACTCATGTGTCAACTAGAGTGATGGTAACTCAAGGGCACGCAGTCCATGAGTATACGATGACAAGGTACATGAGTTGGAAGATGAATGTGTATAGCTTTGGGGTGGTGTTGCTTAAGATAATTACGGGGAGAAGGGCAATGGATAGGAAGAGGCATGTAGTGAAGCATGAACTGGTGTAA | 324 | 0.4259 | MGLAFLHEEAKNPLIYRDFKIPKILMDSDYSAKLSNFWLVKDAPVGDLTHVSTRVMVTQGHAVHEYTMTRYMSWKMNVYSFGVVLLKIITGRRAMDRKRHVVKHELV. | 108 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g01332 | 107 | Pfam | Protein kinase domain | 2 | 97 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g01332 | 107 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 106 | - | - | |
Seca5g01332 | 107 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 98 | IPR011009 | - | |
Seca5g01332 | 107 | PANTHER | OS07G0668900 PROTEIN | 1 | 107 | - | - | |
Seca5g01332 | 107 | ProSiteProfiles | Protein kinase domain profile. | 1 | 107 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g01332 | Seca-Chr5 | 41165362 | 41169502 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g01332 | 1 | 107 | Glycoside Hydrolase | AT3G07070 | 52.336 | 4.14e-32 | 114 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Seca5g01332 | Pkinase | 1.7e-08 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g01332 | - | - | han:110931006 | 139.428 |