Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01332 ATGGGCCTTGCTTTTCTGCATGAGGAAGCTAAAAATCCATTGATATATCGAGACTTCAAAATCCCTAAAATCCTAATGGATTCGGACTATAGTGCGAAACTTTCTAATTTTTGGCTGGTAAAAGATGCCCCAGTGGGTGACTTGACTCATGTGTCAACTAGAGTGATGGTAACTCAAGGGCACGCAGTCCATGAGTATACGATGACAAGGTACATGAGTTGGAAGATGAATGTGTATAGCTTTGGGGTGGTGTTGCTTAAGATAATTACGGGGAGAAGGGCAATGGATAGGAAGAGGCATGTAGTGAAGCATGAACTGGTGTAA 324 0.4259 MGLAFLHEEAKNPLIYRDFKIPKILMDSDYSAKLSNFWLVKDAPVGDLTHVSTRVMVTQGHAVHEYTMTRYMSWKMNVYSFGVVLLKIITGRRAMDRKRHVVKHELV. 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01332 107 Pfam Protein kinase domain 2 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca5g01332 107 Gene3D Transferase(Phosphotransferase) domain 1 1 106 - -
Seca5g01332 107 SUPERFAMILY Protein kinase-like (PK-like) 2 98 IPR011009 -
Seca5g01332 107 PANTHER OS07G0668900 PROTEIN 1 107 - -
Seca5g01332 107 ProSiteProfiles Protein kinase domain profile. 1 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01332 Seca-Chr5 41165362 41169502 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01332 1 107 Glycoside Hydrolase AT3G07070 52.336 4.14e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Seca5g01332 Pkinase 1.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01332 - - han:110931006 139.428