Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01330 ATGAACACACAAAGGGCGTTTGGAGCGGTGGAACTCTTGCTAAACGCTTATGGAGGAGGCGACTGGGGGTATGATTTGGAGTGGTTATGCGATGAAAGGGTGGTGGACGACGGCGCCATCATGCGACATAGAGTGGTCGTGATTTGGGATCCCTTGAAAGGCACTAATAGGCTAACCACATCGCCTTGTGTGCTCTTCTGGATGAAGAGTGACCTTCAAGATTTGGATCTATCAATTGGTGGGATTGTGCTCAGCTTCCTTGCTTTATTTGAGGCCTTGCCAATTCCACCAGATGCCTCAGTGGGTGACTTGACTCATGTGTCAACTAGAGTGACGAGAACTCAAGGGCACGCAGTCCATGAGTATACGATGACAAGGCCTCAAATAAAGCATGGAGGAAGAACAAAATTCCACCAATTCATAGATCCAAAGCTTGAAGGTCACTATTCAACCAGAGGAGCATACAGGGCAATGAGGTTGGCCTATCAGTGCCTTTCAAGAGATCCCAAATCACGATCACTCATGAGTCAGGACTATAGTGCGGAACTTTCTAATTTGTGGCTAGTGAAAGATGCCCCGTTGGGTGACTTGACTAATGTATCAACTAGAGTGACGCGAACTCAAGGGAGAAGGGAAATGGATAGGAAGAGGCCTGTAGCGGAGCATGAAATGGTCGAATGGGCAAGGCCTCAAATAAAGCATGGAGGAAGAACTCAAATCCACCAATTGGTAGATCCAAAGCTTGAAGGTCACTATTTAACTAGAGGAGCACACAGGGAAATGAGGTTGGCCTATCAGTGA 801 0.4732 MNTQRAFGAVELLLNAYGGGDWGYDLEWLCDERVVDDGAIMRHRVVVIWDPLKGTNRLTTSPCVLFWMKSDLQDLDLSIGGIVLSFLALFEALPIPPDASVGDLTHVSTRVTRTQGHAVHEYTMTRPQIKHGGRTKFHQFIDPKLEGHYSTRGAYRAMRLAYQCLSRDPKSRSLMSQDYSAELSNLWLVKDAPLGDLTNVSTRVTRTQGRREMDRKRPVAEHEMVEWARPQIKHGGRTQIHQLVDPKLEGHYLTRGAHREMRLAYQ. 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01330 266 PANTHER OS01G0588500 PROTEIN-RELATED 134 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01330 Seca-Chr5 41151619 41156849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01330 209 264 Trihelix Transcription Factor Family AT1G68690 38.596 1.64e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01330 - - dct:110114816 89.3521