Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01311 ATGTGGGTTAAGATGTTGAAATCCATAGGGAAAAGCCTTAGCCTTGGACAGCACAAGAGTCATGTGGATGGTAAAAACCTGGTTGTTTTGGCACACTGCAATGATTGTGTAGAGGAAAACAAGCAATGCAATTGTGACCATATCATTGTTGAGAATACAAGGAGTACTACTGCTGCAGAAGGTGCCAATGTTGATGCAGAGCATGATGCTAACGCCAATAGTTCTTTTGCTCATGCTGTCCTCAACATGGTGGGAATGCTCATAGGTTTGGGGCAACTGTCAACTCCATATGCTATTGAAAATGGAGGATGGGCATCAGCATTTTTGCTTATGGGACTTGGGGTGATATGTGCTTATAGTTCTCACTTACTTGGAAAATGCCTTGAAAAGAATCCAAAGTTAAGAAGTTACTTGGATATTGGGACTCATGCATTTGGAGCAAAAGGAAGAGTCCTAGCTGCAACATTCATCTACTTGGAAATCTTCATGGCTCTTGTTTCCTACACCATCTCATTACATGACAACGTAATCACAGTCTTTTTAGGGACACATTTGAAGCTACACTTAGCCAAGTTATCCACATCCCAACTCCTAACTGTGGTGGCAGTGTTGATTGCCCTGCCTAGCTTGTGGATCAGAGATCTTTCTCGCATATCTTTCCTTTCAACTGTTGGAATCTTCATGTCTCTTCTCATTTTCATGTCAGTAGCAGCCACTGCAATTTTTGGAGGTGTCCATGCTAATCATGACATACCACTCCTTCAGCTCCACAATATTCCATCAATATCTGGCCTTTATGTTTTTGGTTATGGAGGACACATTGTTTTCCCTGATTTATATAAATCCATGAAAGACCCCTCAAAGTTTACCAAGGTTTCTATTGTGAGTTTCACAATAGTCACGGCACTTTATACGTCATTGGGGTTCATGGGTGCAAAAATGTTTGGGAATGAAGTGAAGTCTCAGATCACTCTTAGCATGCCACCAAAGCAAATTGTAACAAAGATAGCTCTTTGGGCAACCGTGTTGACGCCAATGACCAAATATGCACTTGAATTTGCACCATTTGCAATTCAACTTGAACATAAACTTCCAAATTCCATGAGTGGCAGGACAAAAATGGTAGTTAGGGGCAGTGTAGGTTCACTTTTCCTTTTGGTAATACTAACCCTTGCTCTGTCTGTGCCATATTTTGAGCATGTGCTAGGCCTCACTGGTTCCCTAGTTAGTGTAACCATCGCTTTGATTTTGCCATGTGTTTTCTACATTAAGATTTTTTGGGGTCAAATACCAAAGCATTTCTTAGTGCTTAACCTCTTTGTCATCACATTTGGGTTCATTCTTGGGGTGATGGGCACAATTTCCTCCTCAGAGTTACTATTGAAAAGCTTTCAATCACATCACTCAACTTGA 1413 0.4105 MWVKMLKSIGKSLSLGQHKSHVDGKNLVVLAHCNDCVEENKQCNCDHIIVENTRSTTAAEGANVDAEHDANANSSFAHAVLNMVGMLIGLGQLSTPYAIENGGWASAFLLMGLGVICAYSSHLLGKCLEKNPKLRSYLDIGTHAFGAKGRVLAATFIYLEIFMALVSYTISLHDNVITVFLGTHLKLHLAKLSTSQLLTVVAVLIALPSLWIRDLSRISFLSTVGIFMSLLIFMSVAATAIFGGVHANHDIPLLQLHNIPSISGLYVFGYGGHIVFPDLYKSMKDPSKFTKVSIVSFTIVTALYTSLGFMGAKMFGNEVKSQITLSMPPKQIVTKIALWATVLTPMTKYALEFAPFAIQLEHKLPNSMSGRTKMVVRGSVGSLFLLVILTLALSVPYFEHVLGLTGSLVSVTIALILPCVFYIKIFWGQIPKHFLVLNLFVITFGFILGVMGTISSSELLLKSFQSHHST. 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01311 470 Pfam Transmembrane amino acid transporter protein 73 454 IPR013057 -
Seca5g01311 470 PANTHER AMINO ACID TRANSPORTER 65 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01311 Seca-Chr5 40888979 40891306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01311 33 468 Amino Acid or Auxin Permease AAAP Family AT5G16740 60.820 1.91e-173 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01311 - - lang:109342470 696.041