Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01272 ATGTGTTTAAGCCTTGGAACCAACCGAGTTGTGATTAGTAGCCACCCTGAGACTGCGAGGGAAATTCTATGCGGGTCATCCTTCTCGGACAGGCCCGTTAAAGAATCCGCACGTGTCTTAATGTTCGAGCGTGCCATTGGTTTCGCTCCATACGGGACCTATTGGCGCCATCTTCGTAAAGTGGCTACAACTCACATGTTCTCTCCGAGGAGTATCTCGGGCTTGGAGAGTCTTCGGAAACGTGTGGGTTGTGAAATGGTGATGAAGACGAAGAAAGAGATGGAGGAAAAAGGTGTGGTGGAGGTTCGGGGGATATTGGATGAAGGGTCTCTTAGCAATGTTTTGGAGAGTGTGTTTGGTAGTGGTATGAGATCAGAAACAAAAGAGGTGTTGGGAGATATGGTTAAGGAAGGGTATGAGTTAATTGCTGAGTTTAATTGGGGAGATTATTTTCCATTTAAATTTTTGGACTTTAATGGGGTCAAAAGAAGGTGTCACAAATTGGCGGCAAAAGTCAACACTGTGGTGGGTCAAATTGTGGAAGAAAGGAAAAGATCTGGGGAGTTTGTTGGACAGAATGATTTTCTTAGCGCTTTGTTGTCGTTGCCTGAAGAAGAGAGGTTAGGTGATTCAGATGTAGTGGCTATTTTGTGGGAAATGATATTTCGGGGAACAGACACGGTTGCTATACTACTCGAATGGATTATGGCCATGATGGTGATACACCAAGACGTACAAACGAAAGCCCGCCAAGAGATTGACACGTGCGTTGGCCAAAACGGTCACGTGCGAGACTCGGACATTCAAAACCTCCCTTACCTCCAAGCCATAGTCAAGGAGGTTCTGCGATTGCACCCACCAGGCCCGTTGCTGTCGTGGGCTCGTCTTGCAATCCATGATGTCCACGTGGACAAGGTCCTTGTGCCAGCTGGTACGACTGCAATGGTTAACATGTGGGCCATAACACATGACTCGTCTGTTTGGGAGGACCCATGGGCCTTTAAGCCCGAACGGTTCATGAAGGAAGATGTGTCTATCATGGGTTCAGACATGAGACTGGCACCGTTCGGTGCAGGACGTAGGGTGTGCCCGGGTAAAGCAATGGGCTTAGCCACGGTTCATCTCTGGCTTGCACAGCTTCTGCATCATTTCATATGGGTTCCGGTGCAGCCTGTGGATCTTTCAGAATGCCTCAAGCTCTCCCTTGAAATGAAAAAGCCTTTAAGATGCCAAGCGATTTGCAGGAAAAACTTTGTAAGCTCTTGA 1266 0.4787 MCLSLGTNRVVISSHPETAREILCGSSFSDRPVKESARVLMFERAIGFAPYGTYWRHLRKVATTHMFSPRSISGLESLRKRVGCEMVMKTKKEMEEKGVVEVRGILDEGSLSNVLESVFGSGMRSETKEVLGDMVKEGYELIAEFNWGDYFPFKFLDFNGVKRRCHKLAAKVNTVVGQIVEERKRSGEFVGQNDFLSALLSLPEEERLGDSDVVAILWEMIFRGTDTVAILLEWIMAMMVIHQDVQTKARQEIDTCVGQNGHVRDSDIQNLPYLQAIVKEVLRLHPPGPLLSWARLAIHDVHVDKVLVPAGTTAMVNMWAITHDSSVWEDPWAFKPERFMKEDVSIMGSDMRLAPFGAGRRVCPGKAMGLATVHLWLAQLLHHFIWVPVQPVDLSECLKLSLEMKKPLRCQAICRKNFVSS. 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01272 421 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 356 365 IPR017972 GO:0005506|GO:0016705
Seca5g01272 421 PRINTS P450 superfamily signature 276 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01272 421 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01272 421 PRINTS P450 superfamily signature 354 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01272 421 PRINTS P450 superfamily signature 223 240 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01272 421 SUPERFAMILY Cytochrome P450 2 415 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01272 421 PRINTS E-class P450 group I signature 353 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01272 421 PRINTS E-class P450 group I signature 232 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01272 421 PRINTS E-class P450 group I signature 275 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01272 421 PRINTS E-class P450 group I signature 212 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01272 421 PRINTS E-class P450 group I signature 363 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01272 421 PRINTS E-class P450 group I signature 317 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01272 421 PANTHER CYTOCHROME P450 78A7-RELATED 1 415 - -
Seca5g01272 421 Pfam Cytochrome P450 2 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01272 421 Gene3D Cytochrome P450 1 419 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g01272 421 FunFam Cytochrome P450 78A5 1 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01272 Seca-Chr5 39484753 39486613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01272 1 416 Cytochrome P450 AT1G13710 58.372 1.21e-176 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01272 - - gmx:100799715 728.013