Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01177 ATGGCTCGTGGTGAATTGGGAGTGCTGAATGCCCTTGATGCAGCGAAGACACAGTGGTACCACTTCACTGCCATCATCATTGCTGGTATGGGATTCTTCACAGATGCATACGATCTTTTCAGCATACCAAACGTCACCAAGTTGCTTGGAAGAATATACTACACAGAAGAAGGAGCAGCAAAGCCAGGAACGCTTCCTCCAAATGTGTCAGCTGCAGTTAATGGTGTTGCACTTTGTGGCACTCTAGCAGGCCAACTTTTCTTTGGTTGGCTTGGTGACAAATTGGGTAGGAAGAAGGTTTATGGCCTAACTCTTGCCCTTATGGTCATATCCTCTCTTGCCTCTGGCCTCTCTTTTGGCCACACTGCAAAGGGTGTCATATCCACACTCTGTTTCTTCAGGTTCTGGCTTGGTTTTGGCATTGGTGGTGACTACCCTCTCTCTGCTACCATCATGTCAGAATATGCAAACAAAAGGACTCGTGGGGCTTTCATAGCTTCAGTGTTTGCTATGCAAGGCTTTGGAATCTTGGCTGGTGGGATTGTTTCCCTCATAGTTGCAAGTGCATTTGATCATGCATACAAGGCTCCACCTTACAAGGTTGATCCTAAAGCATCCCTTGTGCCTGAAGCTGACTATGTGTGGCGCATCATTCTCATGTACACAGCACTTGTTGCCAAGAATGCAAAACAAGCAGCACAAGACATGTCAAAGGTGTTACAAGTAGAAATTGAAGCTGAACAGGACAAGGTAGACCAAATAGTCACCAGAGATGAAAACAACTTTGGTTTGTTCACCAAGGAATTTGCTAGGAAACATGGGATGCACTTGCTTGGAACCACTACCACTTGGTTCCTTCTAGACATTGCTTACTACAGTTCAAACCTTTTCCAAAAAGACATTTACAGCAACATTGGGTGGCTTCCTCCTGCAGCTGAAATGAATGCAATTCAGGAAGTTTACAGGGTTGCTAGAGCAACAACACTTATAGCACTTTGTGGCACTGTGCCAGGGTACTGGTTCACAGTGGCCTTCATAGACATATTGGGACGTTTCTTCATCCAACTCATGGGCTTCTTCTTCATGACTGTGTTCATGTTTGCACTTGCCATTCCATATCACCACTGGACCAAGAAAGAACACAGAATTGGGTTTCTTGTCATGTATGCATTCACCTTCTTCTTTGCCAATTTTGGTCCAAACTCCACCACTTTTGTTGTGCCTGCAGAGATCTTCCCAGCCAGGTTGAGGTCTACCTGTCATGGCATATCCTCTGCTGCAGGGAAAGCTGGAGCCATTGTGGGTGCTTTTGGGTTCTTGTATGCCTCACAGAGCAAGGATCCAGCAAAGAGAGATGCAGGGTACCCTGCTGGTATTGGCATGAAGAACACTCTTATTTTGCTTGCTGTCACCAATTGTCTTGGTATGTTTTTCACCTTCCTTGTGCCAGAATCTAAAGGGAAATCGTTGGAGGAGTTGAGTGGAGAGAACGAAGATGATGAAGGAGGTGTTGAAACTGCTGAGCAACAAGCCACCTCTAGTAGGACTGTTCCAGTTTGA 1560 0.4577 MARGELGVLNALDAAKTQWYHFTAIIIAGMGFFTDAYDLFSIPNVTKLLGRIYYTEEGAAKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGLTLALMVISSLASGLSFGHTAKGVISTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIASVFAMQGFGILAGGIVSLIVASAFDHAYKAPPYKVDPKASLVPEADYVWRIILMYTALVAKNAKQAAQDMSKVLQVEIEAEQDKVDQIVTRDENNFGLFTKEFARKHGMHLLGTTTTWFLLDIAYYSSNLFQKDIYSNIGWLPPAAEMNAIQEVYRVARATTLIALCGTVPGYWFTVAFIDILGRFFIQLMGFFFMTVFMFALAIPYHHWTKKEHRIGFLVMYAFTFFFANFGPNSTTFVVPAEIFPARLRSTCHGISSAAGKAGAIVGAFGFLYASQSKDPAKRDAGYPAGIGMKNTLILLAVTNCLGMFFTFLVPESKGKSLEELSGENEDDEGGVETAEQQATSSRTVPV. 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01177 519 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 487 IPR020846 GO:0022857
Seca5g01177 519 Coils Coil 230 250 - -
Seca5g01177 519 FunFam Inorganic phosphate transporter 1-6 20 508 - -
Seca5g01177 519 MobiDBLite consensus disorder prediction 489 519 - -
Seca5g01177 519 Coils Coil 490 510 - -
Seca5g01177 519 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 490 - -
Seca5g01177 519 Pfam Sugar (and other) transporter 30 493 IPR005828 GO:0016020|GO:0022857|GO:0055085
Seca5g01177 519 CDD MFS_PhT 25 486 - -
Seca5g01177 519 SUPERFAMILY MFS general substrate transporter 12 494 IPR036259 -
Seca5g01177 519 Gene3D MFS general substrate transporter like domains 20 511 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01177 Seca-Chr5 36691054 36692676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01177 1 519 Inorganic Solute Cotransporters AT2G32830 73.801 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01177 K08176 - tcc:18602672 839.721