Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01152 ATGGGGTTACCAAGTCCTACACTTCACTTTCTCCTCCTAACTCTTTTTATCTCTCTATTGCACAGACCCAGCTTTGCAGTGAAAAAGTCATATGTGGTGTACTTGGGAGCCCACTCACATGACCCAGAATTGTCTTCAGTTGATTTCAATCATGTCACAGAGTCCCACTATGAGTTTCTGGGATCTTTCTTGGGAAGTCCTAATACAGCCAAAGAATCCATCTTTTACTCCTACACAAGGCACATCAATGGCTTTGCTGCAAATTTAGAAGAAGAAGTAGCAGTTGAGATAGCAAAGCATCCCAAGGTATTGTCAGTGTTTGAGAACAGTGGAAGAAAACTACACACCACTAGGTCATGGGGATTCATGGGGCTAGAGGAGGATAATGGGGTGATCTCATCCAGCTCAATTTGGAACAAAGCCAGATTTGGTGAAGGTGTGATTATAGGAAACCTTGATACAGGTGCTTGGCCTGAATCCAAGAGCTTTAGTGATGAAGGGTTTGGACCAATTCCATCAAAGTGGAGAGGAATCTGTGATAACGGGATTGATGCTAGTTTTCACTGCAACAGGAAGCTAATAGGGGCAAGATACTTCAACAAAGGTTATGCATCTGTTGCTGGCCCACTCAATTCCTCCTTTGACTCACCTAGAGACAATGAAGGCCATGGATCCCACACTCTATCAACAGCTGGTGGTAACATGGTACCTGGTGTCAGTGTCTTTGGCCAGGGCTCTGGAACAGCAAAAGGTGGCTCACCAAGAGCCAGGGTGGCAGCATACAAGGTCTGTTGGCCCCCAATTAGTGGTGATGAGTGCTTTGATGCAGATATACTTGCAGGTTTTGATATGGCCATCCATGATGGTGTTGATGTGTTGTCTGTGTCACTTGGTGGCTCTGCCTCTGCATTTTTCAATGATAGTGTTTCTATTGGATCCTTCCATGCTGCTAAGAAAGGGATTGTGGTTGTTTGCTCTGCTGGCAATAGTGGACCTGCTGATGCTACTGCAGAAAACCTTGCACCATGGTATATCACAGTTGGTGCCAGCACAATGGATAGAGAGTTCCCTAGTTATGTTGTCCTTGGTAACAAGATAAGCTTGAAGGGTGCAAGTTTATCAGCTGCAAGATTGGAACACAAGTTCTATCCAATTATTAAAGCTACAGATGCTAAGTTGGCTAGTGCAACAGCTGAAGATGCTGTGCTGTGCCAAAATGGAACTCTGGATCCCAATAAGGTAAAAGGAAAGATTGTAGTGTGCCTCCGAGGGATAAATGCACGAGTGGACAAGGGAGAGCAAGCTTTGCTAGCTGGTGCTGTGGGAATGGTCCTTGCCAATGATAAGACTAATGGCAATGAAATTTTAGCTGATCCTCATCTCCTTCCTGCTTCTCATATCAATTTCACTAATGGTGTTGCTGTCTTTGATTACATCAACTCAACCAATGCTAGGTTCCCTGTGGCTTATATTACACATCCAAAGACAAAATTGCATACTAAGCCAGCCCCCTTCATGGCAGCATTTTCATCCAAAGGACCAAACACTATTGTACCAGAGATCCTAAAGCCTGATATCACTGCACCAGGAGTGTCAGTTATAGCTGCCTACACTGAAGCTGAAGGGCCAACTAATCAAGAGTTTGACAGTCGCCGGATTCCATATAACTCAGTCTCAGGCACATCAATGTCATGCCCTCACATTTCAGGCATTGTGGGTTTGTTGAAAACCCTATATCCTTCATGGAGTCCTGCTGCTATTAAATCAGCAATCATGACCACAGCTACAACACTAGATAATGAGGTGGAGCCACTGTTGAATGCTACTGACAGCCAGGCAACACCATTTAGTTATGGGGCAGGACATGTTGAACCAAACAGAGCAATGGATCCTGGCCTTGTCTATGACACAACAATGGATGATTACCTGAACTTGTTGTGTGCTTTAGGTTATAATGAAACACAAATCTCAATGTTTACAGAAGGTCCTTATCAATGCCACAAGAATTTTAGTCTCCTCAACCTAAACTATCCTTCAATCACAGTCCCAAATCTCTCAGGGTCAGTAACAGTTACAAGGACATTAAAAAATGTTGGTTCTACAGCAACATATATTGCTCATGTTCAAAACCCAAATGGGATCAGCATTTCAGTGGAGCCAAGCATCTTGAAGTTCAAAAGGGTTGGTGAAGAAAAGAGCTTTAAAGTAACCTTGAAAGTCAAGCAAGGAAAAGCAACAAATAACTATGTGTTTGGAAAGTTGATATGGTCAGATGGCAAGCATTATGTCAGGAGTCCTATAGTTGTGAAGGCACTCTAG 2319 0.4355 MGLPSPTLHFLLLTLFISLLHRPSFAVKKSYVVYLGAHSHDPELSSVDFNHVTESHYEFLGSFLGSPNTAKESIFYSYTRHINGFAANLEEEVAVEIAKHPKVLSVFENSGRKLHTTRSWGFMGLEEDNGVISSSSIWNKARFGEGVIIGNLDTGAWPESKSFSDEGFGPIPSKWRGICDNGIDASFHCNRKLIGARYFNKGYASVAGPLNSSFDSPRDNEGHGSHTLSTAGGNMVPGVSVFGQGSGTAKGGSPRARVAAYKVCWPPISGDECFDADILAGFDMAIHDGVDVLSVSLGGSASAFFNDSVSIGSFHAAKKGIVVVCSAGNSGPADATAENLAPWYITVGASTMDREFPSYVVLGNKISLKGASLSAARLEHKFYPIIKATDAKLASATAEDAVLCQNGTLDPNKVKGKIVVCLRGINARVDKGEQALLAGAVGMVLANDKTNGNEILADPHLLPASHINFTNGVAVFDYINSTNARFPVAYITHPKTKLHTKPAPFMAAFSSKGPNTIVPEILKPDITAPGVSVIAAYTEAEGPTNQEFDSRRIPYNSVSGTSMSCPHISGIVGLLKTLYPSWSPAAIKSAIMTTATTLDNEVEPLLNATDSQATPFSYGAGHVEPNRAMDPGLVYDTTMDDYLNLLCALGYNETQISMFTEGPYQCHKNFSLLNLNYPSITVPNLSGSVTVTRTLKNVGSTATYIAHVQNPNGISISVEPSILKFKRVGEEKSFKVTLKVKQGKATNNYVFGKLIWSDGKHYVRSPIVVKAL. 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01152 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 68 769 IPR045051 -
Seca5g01152 772 Pfam Subtilase family 144 607 IPR000209 GO:0006508|GO:0008236
Seca5g01152 772 SUPERFAMILY PA domain 400 483 IPR046450 -
Seca5g01152 772 Gene3D - 646 772 - -
Seca5g01152 772 CDD PA_subtilisin_like 359 491 - -
Seca5g01152 772 Pfam Fibronectin type-III domain 674 769 IPR041469 -
Seca5g01152 772 SUPERFAMILY Subtilisin-like 114 633 IPR036852 GO:0004252|GO:0006508
Seca5g01152 772 Gene3D - 353 499 - -
Seca5g01152 772 FunFam subtilisin-like protease SBT1.5 353 498 - -
Seca5g01152 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 560 570 IPR023828 -
Seca5g01152 772 FunFam Subtilisin-like protease SBT5.3 20 115 - -
Seca5g01152 772 FunFam Subtilisin-like protease SBT1.5 646 772 - -
Seca5g01152 772 Pfam Peptidase inhibitor I9 30 115 IPR010259 -
Seca5g01152 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 115 IPR037045 -
Seca5g01152 772 FunFam Subtilisin-like protease SBT1.5 146 403 - -
Seca5g01152 772 CDD Peptidases_S8_3 113 596 IPR034197 -
Seca5g01152 772 ProSiteProfiles Serine proteases, subtilase domain profile. 119 629 - -
Seca5g01152 772 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Seca5g01152 772 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Seca5g01152 772 PRINTS Subtilisin serine protease family (S8) signature 559 575 IPR015500 -
Seca5g01152 772 Gene3D Peptidase S8/S53 domain 146 642 IPR036852 GO:0004252|GO:0006508
Seca5g01152 772 Pfam PA domain 404 473 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01152 Seca-Chr5 35471274 35479447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01152 30 770 Subtilisin-like Serine Gene Family AT2G04160 65.323 0.0 1005
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01152 - - gmx:100788007 1338.17