Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01108 ATGGCGGGGTTGCCGGTGATGACTTATTTTCTAAGAGCAATACAGATTGCCTTCACTTTCGTGGTATTTCCCTGTCTTCTCCTTGCATATATGGGCCAAGCTGCTTATTTGCTGAAGAATCCTTCTTCTTATTCAAATATATTCTATGATTTTGTTCCAGATAGTCTCTTCTGGCCAGTGTTTGTGATAGCCACACTTGCTGCTATGATTGCCAGCCAAGCAATGATATCTGCTACATTTTCATGCATAAAGCAATCTATGGCTCTGGGATGCTTTCCCAGGCTCAAGATAATTCACACCTCAAGGAAGTTCATGGGTCAAATTTACATCCCTTTCTTGCTTAGCCTTCCAGCTCTTCACTCTACCATAGTTTTTGTCTGCATTAAATATGTCCCTATCCCAGTGGTTCCTCAAGAGGAAAGGTTTCTATTTAGAAGAGTTTGTCCAAAAGATTACCACATGTTCCGTTGTGTTGCCAGGTATGGTTACAAAGATGTAAGGAAGGAAGATCACCAAGCATTTGAGCAACTTCTTATTGAAAGTCTTGAGAAATAA 555 0.4054 MAGLPVMTYFLRAIQIAFTFVVFPCLLLAYMGQAAYLLKNPSSYSNIFYDFVPDSLFWPVFVIATLAAMIASQAMISATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPFLLSLPALHSTIVFVCIKYVPIPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDVRKEDHQAFEQLLIESLEK. 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01108 184 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 112 183 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca5g01108 184 Pfam K+ potassium transporter 12 113 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01108 Seca-Chr5 33680040 33681134 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01108 107 184 Inorganic Solute Cotransporters AT1G60160 84.615 3.96e-43 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01108 K03549 - vum:124848212 180.644