Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01101 ATGGAGTGCTTAAAGAGAAATAGACAAGTAATCACTTTTTCTATGTTGATCTTCCTTGTACTCCCAACTCTAATTGTTGCGGAATGCACATGTGACCCAGAAGATGAAGAGAGGGATAAATCTAAAGCTCTAAGGTACAAAATAGCAGCTTTAGTGTCAATACTAGTTGCAAGTGCAATTGGTGTTTGTATTCCACTCCTTGGCAAAGTGATACCTGCTTTAAGCCCTGAGAAAGATATCTTCTTTATCATTAAGGCCTTTGCTGCTGGTGTTATATTGTCCACTGCTTTCATTCATGTGTTGCCTGATGCTTTTGAGAATCTCACTTCACCATGTCTTAATGAGCATCCATGGGGTGAATTTCCCTTCACTGGGTTTGTGGCTATGTGCACTGCTATGGGGACACTTATGATTGATACTTATGCCACTGCTTATTTTAAGAAACGGCATTTTAAGAATGGTCAAGTTGATGCCACTGATGTAGAGAAGGAATCAGGGCATGAAGGACATGTGCATCTTCATACACATGCAACACATGGTCATGCACATGGGCATGTTACTTCTGACTCTGAGTCTTCAGCAGAACTTCTTCGTCATAGGGTCATATCACAGGTGTTGGAGTTGGGGATTATTGTTCATTCTGTTATAATAGGGATTTCATTGGGAGCTTCAGAGAGTCCCAAAACAATAAGACCTCTTGTAGCTGCTTTGACTTTTCATCAGTTCTTTGAAGGCATGGGACTTGGAAGTTGCATAATTCAGGCAAAATTCAAGAGGTTATCAGTTATAACTATGGGATTGTTCTTCGCATTAACAACTCCAATAGGGATTGGAATTGGTTTAGGGATCACTAATAGTTACGATGAAAACAGTCCAACTGCCCTTATTTTGGAAGGAATCTTCGATGCAGCATCAGCTGGGATCTTAATATATATGGCACTAGTAGACCTTCTTGCAGCTGATTTTATGAATCCAAGGATGCAAAAAAGTGGTAGGCTTCAATTAGGATCCAATCTCTCTCTTCTACTAGGAGCTGAATGTACATGTGACCCAGAAGATGAAGAGAGGGATAAATCCAAAGCTCTAAGGTACAAAATAGCAGCTTTAGTGTCAATACTAGTTGCAAGTGCAATTGGTGTTTGTATTCCACTCCTTGGCAAAGTGATACCTGCTTTAAGCCCTGAGAAAGATATCTTCTTTATCATTAAGGCCTTTGCTGCTGGTGTTATATTGTCCACTGCTTTCATTCATGTGTTGCCTGATGCTTTTGATAACCTCACTTCCCCTTGTCTGAATGAAAATCCATGGGCTGAATTTCCCTTCACTGGGTTTGTGACTATGTGCACTACTATGGGGTCCCTTATGGTTGATACTTATGCCACTGCTTATTTTCAGAAACGGCATCTGAAGAGTGGCCAAGTTGATGCAACAGATGTGGAGAATGAATCAGGGCATGAAGGACATGTGCATGTTCACACCCATGCAACACATGGTCATGCTCATGCTCATGGTCATGTTTCTTCTGAGTCCTCAGAACTTCTTCGCCATAGGGTCATATCACAGGTGTTGGAGTTGGGGATTATTTTTCATTCTGTCATAATAGGGATTTCAGTGGGAGCTTCAGAGAGTCCCAAAACAATAAGGCCTCTTGTAGCTGCTCTGACTTTTCATCAGTTCTTTGAGGGCATTGGACTTGGAAGTTGCATAACTCAGGCAAAATTTGAGAGGTTATCTGTTACAATTTTGGGATTGTTCTTCGCATTAACAACTCCAATAGGGATTGGAATTGGTTTAGGGATCACTAATAGTTACGATGAAAACAGTCCAACTGCCCTTATTATTGAAGGAATCTTCAATGCAACATCAGCTGGGATCTTAATCTATATGGCACTTGTAGATCTTCTTGCAGCTGATTTTATGAATCCAAGGATGCAGAAAAATGGTAGGCTTCAATTTGGATCCAATCTGTCTCTTCTGCTAGGAGCTGGTTGCATGTCTATTCTTGCCAAATGGGCTTAA 2019 0.4091 MECLKRNRQVITFSMLIFLVLPTLIVAECTCDPEDEERDKSKALRYKIAALVSILVASAIGVCIPLLGKVIPALSPEKDIFFIIKAFAAGVILSTAFIHVLPDAFENLTSPCLNEHPWGEFPFTGFVAMCTAMGTLMIDTYATAYFKKRHFKNGQVDATDVEKESGHEGHVHLHTHATHGHAHGHVTSDSESSAELLRHRVISQVLELGIIVHSVIIGISLGASESPKTIRPLVAALTFHQFFEGMGLGSCIIQAKFKRLSVITMGLFFALTTPIGIGIGLGITNSYDENSPTALILEGIFDAASAGILIYMALVDLLAADFMNPRMQKSGRLQLGSNLSLLLGAECTCDPEDEERDKSKALRYKIAALVSILVASAIGVCIPLLGKVIPALSPEKDIFFIIKAFAAGVILSTAFIHVLPDAFDNLTSPCLNENPWAEFPFTGFVTMCTTMGSLMVDTYATAYFQKRHLKSGQVDATDVENESGHEGHVHVHTHATHGHAHAHGHVSSESSELLRHRVISQVLELGIIFHSVIIGISVGASESPKTIRPLVAALTFHQFFEGIGLGSCITQAKFERLSVTILGLFFALTTPIGIGIGLGITNSYDENSPTALIIEGIFNATSAGILIYMALVDLLAADFMNPRMQKNGRLQFGSNLSLLLGAGCMSILAKWA. 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01101 672 PANTHER ZINC/IRON TRANSPORTER 43 345 - -
Seca5g01101 672 NCBIfam ZIP zinc/iron transport family 349 672 IPR004698 GO:0005385|GO:0016020|GO:0071577
Seca5g01101 672 NCBIfam ZIP zinc/iron transport family 31 346 IPR004698 GO:0005385|GO:0016020|GO:0071577
Seca5g01101 672 Pfam ZIP Zinc transporter 364 669 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Seca5g01101 672 Pfam ZIP Zinc transporter 46 345 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01101 Seca-Chr5 33624357 33633141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01101 345 672 Inorganic Solute Cotransporters AT3G12750 53.754 5.77e-125 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01101 K14709 - gmx:547695 541.191