Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01074 ATGCAGCTGAAGAGAGAAGAGTCTCCAGACACGGGGAAGAAAAATTGTTCTGAGCCTGCACTTAAGAGGCCAAGAATTGAGACCCCATCTCCATTACCAACTTTTAAGGTTCGGAAAGAGAAACTGGGGGACCGAATCACTGCTCTTCAGCAATTGGTTTCACCTTTTGGAAAGCTTATCCATCCACTTTGCAAACTTGGCACGAATGACCTGTAA 216 0.4537 MQLKREESPDTGKKNCSEPALKRPRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKLIHPLCKLGTNDL. 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01074 71 CDD bHLH_AtbHLH_like 32 58 IPR045239 -
Seca5g01074 71 MobiDBLite consensus disorder prediction 1 21 - -
Seca5g01074 71 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01074 Seca-Chr5 32025505 32026020 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01074 4 58 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G05170 70.909 3.29e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01074 - - gmx:100805087 102.064