Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01062 ATGGAGGAAACGCCTAAGCTTATCCATGGAACAATTGAAGCTACCATCTTCAATGCCACACCTTACTCACCTTCATTTCCCATCAATTGTTTATGTACAAATGGAAGGCCTGCTTATGTGACCATCAAGATAAACGACAAGAAAGTGGCTAAAACGACCTTAGAACGTGAACGTGTATGGAACCAAACCTTTCAGATTCAGTGTGCTCATCCAGCTGATTCTTCTATCACCATTACACTAAAAACTTCTTGTTCCGCATTGGGGAAGTTTCATATCTAG 279 0.4086 MEETPKLIHGTIEATIFNATPYSPSFPINCLCTNGRPAYVTIKINDKKVAKTTLERERVWNQTFQIQCAHPADSSITITLKTSCSALGKFHI. 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01062 92 Pfam C2 domain 38 85 IPR000008 -
Seca5g01062 92 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 83 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01062 Seca-Chr5 31729451 31730233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01062 30 92 Phospholipase D Gene Family (Wang group) AT1G55180 68.750 5.24e-24 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01062 K01115 - gmx:100807431 162.54