Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01037 ATGGCGGAGAAAGGAAGTGTGAGTTTAGAAGGAGAGAAGGTGATATTGGTCCCATACATGGAGGCACACGTCCCCAAGTATCATGAGTGGATGCAAGACCCTTCTCTTCTTGAAGCCACTGGCTCTGAGCCCCTTACCCTTGAGCAGGAGTACCAGATGCAACTCTCCTGGTCTCGTGACCTTAACAAGGAGACGTTTATTGTGTTGGATAAGGACTTCGTTCTTGGAGATTTCTTACATGGGGAACCCCATGTTGAAGCCATGGTTGGTGATGTAAACATTTTCATGAATGACGTGAACAATCCTCACATGGCAGAGGTTGAAATAATGATAGCTGAACAAAAGAGCCGTGGAAAAGGGCTTGGAAAGGAGTCCGTTCTGAAGATGATGGCCTTTGCTATTGAGAAGTTACAGATCAACATCTTTCGGGTTAAAATTGGAGAATCCAATGTAGCATCCCTTAACCTGTTCAGAAAATTGGTTTGTCTGCTGCTTCTCTATCTTTCCCTTCATATTGAAGGCATGATGTGTCTTATCTTACCACCATGCATTTAA 555 0.4414 MAEKGSVSLEGEKVILVPYMEAHVPKYHEWMQDPSLLEATGSEPLTLEQEYQMQLSWSRDLNKETFIVLDKDFVLGDFLHGEPHVEAMVGDVNIFMNDVNNPHMAEVEIMIAEQKSRGKGLGKESVLKMMAFAIEKLQINIFRVKIGESNVASLNLFRKLVCLLLLYLSLHIEGMMCLILPPCI. 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01037 184 Gene3D - 4 161 - -
Seca5g01037 184 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 160 IPR016181 -
Seca5g01037 184 Pfam Acetyltransferase (GNAT) domain 14 160 IPR000182 GO:0016747
Seca5g01037 184 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 3 167 - -
Seca5g01037 184 PANTHER N-ACETYLTRANSFERASE 9 1 160 IPR039135 GO:0008080
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01037 Seca-Chr5 30807505 30811448 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca5g01037 Acetyltransf_3 1.5e-22 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01037 K25762 - gmx:100817900 259.225