Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01011 ATGGCCACTTCTTCTCTGAGTATTGCTGATTCACATTCTCCGTCAACAGCACCCGAAGTTGCAGAGAACGATCTTCAGCCATTTTTTGTTCTTCATAAAGCTTCATCCCGAAGAAAAGATAGAACGTCAACAGAACAGGGAAAATTGCGCAAGAGAAATGAGCTATCTCCATCATCACCACCACAAAGTGCAAAGAAATTGGTAGGAAGTACAACTGAAGAATGTGATCGCCATTTGTTTCAGAAACTACAGATTGAAACTTTTGAAATTGTTTGGGCAAAGATTGAATCTACCATTAAGGTCCTCTATTCATCTTCCCCCAAGCCTAGTAACTTACTGCTATTGACTTTGCTGTGTGTTCATGTTGGCATTATAATTGATTCTAGGTTTAGAGAAAAGGATATTTTTATTGTATGTAATTACTGA 426 0.3803 MATSSLSIADSHSPSTAPEVAENDLQPFFVLHKASSRRKDRTSTEQGKLRKRNELSPSSPPQSAKKLVGSTTEECDRHLFQKLQIETFEIVWAKIESTIKVLYSSSPKPSNLLLLTLLCVHVGIIIDSRFREKDIFIVCNY. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01011 141 MobiDBLite consensus disorder prediction 53 68 - -
Seca5g01011 141 MobiDBLite consensus disorder prediction 1 20 - -
Seca5g01011 141 MobiDBLite consensus disorder prediction 1 68 - -
Seca5g01011 141 MobiDBLite consensus disorder prediction 33 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01011 Seca-Chr5 29716951 29718285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01011 19 108 Core DNA Replication Machinery Family AT5G16690 46.154 9.22e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01011 K02605 - gmx:100780646 139.428