Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g01010 ATGAGCCTGTCGAAGCTGTTGAAGGCCTCGGAGTGGCACCGGTCATCGCCGTTTTCACCATGGGAGGAAGAGGATGTTTTGAGAGATCTCAATGCTAGTGTATTTAATGATATACAACAATGGGTTCTGGAGTGCTTCAATGCTACAAGATTGCTTGGAGAACCAAGTATTGCTGAAGCAACTAGGTCTTTTCCTATTCTAAATGACACTACTCCCGGGCAGCTGTTCACTGCATTGGTCATTACCAGAAACATGGAGTTTGTTGATGATATATGGACATTTGAAGAGCTCGGAGATTTCTTGAAATCCCGTGGATGCCACGTGGCTATGCTCTCATCACTGGAGTTTTCATTAAAAAATGGAATTTCTGGTTGCCTGAAAGCTTTATTGCGAAAGCTTCTAGGGGGTGCTATCGACTCGGCTGATATATCAATATTGGCATCATGGTATAGAGAACAAGACAACTACAATAAACCACTAGTGCTGATCATTAATGATTTGGAAAGATGTTGCGGATCAGTCTTAACGGATTTTATCCTGATGTTGAGGTCAACTATGGCTGAGGCCTCCCAGCATACATACTATAACAACAACCAACACATATTCCTAGTAGGTGGAGTTGGTTAA 627 0.4258 MSLSKLLKASEWHRSSPFSPWEEEDVLRDLNASVFNDIQQWVLECFNATRLLGEPSIAEATRSFPILNDTTPGQLFTALVITRNMEFVDDIWTFEELGDFLKSRGCHVAMLSSLEFSLKNGISGCLKALLRKLLGGAIDSADISILASWYREQDNYNKPLVLIINDLERCCGSVLTDFILMLRSTMAEASQHTYYNNNQHIFLVGGVG. 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g01010 208 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 24 188 IPR020795 GO:0003677|GO:0005664|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g01010 Seca-Chr5 29710964 29712330 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g01010 24 182 Core DNA Replication Machinery Family AT5G16690 52.830 1.81e-55 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g01010 K02605 - gmx:100780646 262.692