Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00967 ATGGCGCGGCTCCTCCCGAAGCTGGCGCTAATCGTGACGGCACTCGCGTTCCTGTTCTCTCCCTCTCAATCTGCCGTATTCAGCGTAGATCTAGGCTCAGAATCGCTCAAAGTGGCGGTGGTAAACCTAAAACCCGGTCAGAGCCCGATCTCGATCGCGATCAACGAGATGTCGAAGCGGAAATCGCCGGCGCTGGTGTCGTTCCACGACGGCAATCGCCTTCTCGGCGAGGAAGCCGCGGGTCTGGCCGCTCGCTATCCCCAAAAAGTGTATTCCCAAATTAGGGACCTCATAGGGAAACCCTACGCTTCAGCAAAGAACTTTCTAGATTCAATGTACTTGCCTTTCGAAGTGAAGGAAGATTCCAGAGGCACCGTGAGTTTCGTAGTGGACGAAAACGGCACCGAGTATTCTCCGGAGGAATTGGTTGCCATGGTTTTGAGCTACGCTACGAGTTTAGCGGAATTCCACTCGAAAATTCCTATCAAAGACGCGGTGATCTCCGTGCCACCGTATTTTGGCCAAGCTGAACGGAAAGGGTTGGTTCAGGCGGCACAGTTAGCGGGGATTAATGTTCTTTCGTTGATAAACGAGCATTCCGGTGCTGCGCTTCAGTATGGGATTGATAAGGACTTCTCAAACGAGTCAAGGCATGTGATTTTCTACGACATGGGTTTCAGCAGTACCTATGCTGCGCTTGTGTATTTCTCTTCTTATAAAAGTAAAGAGTATGGGAAGACGGTGTCGGTGAACCAATTTCAGGTTAAGGATGTTCGTTGGAACCCAGAGCTGGGTGGTCAAAATATGGAATCACGATTGCTGGAGTATTTTGCTAATGAGTTCAATGCACAAGTTGGTAATGGAATAGATGTGAGGAGATTCCCCAAGGCTATGGCTAAATTGAAGAAACAGGTCAAACGAACAAAAGAAATTCTTAGTGCAAACACAGCAGCTCCCATTTCAGTAGAATCTCTTCATGGTGACGTGGACTTCAGGAGCACAATAACCCGTGAAAAATTTGAAGAGCTCTGTGAAGATATTTGGGAAAAATCTCTTTTACCTGTGAAAGAGGTGCTTGAGCATTCGGGCCTATCAATGGAACAAATCTATGCAGTGGAGTTGATCGGAGGTGCTACCAGAGTGCCAAAGTTACAGGCTAAGCTTCAAGAGTTCCTTGGGAGAAAAGAACTTGATAGGCATCTTGATGCTGATGAAGCAACAGTTCTTGGTGCAGCTCTGCACGCTGCAAATTTGAGTGATGGAATCAAATTGAACCGCAAACTAGGAATGATTGATGGTTCCTTATATGGATTTGTGGTTGAGTTGAATGGTCCTGATCTTTTGAAAGATGAAAGCTCAAGGCAGTTACTGGTACCACGTATGAAGAAACTCCCGAGTAAGATGTTCAGATCTGTTAATCATAACAAAGATTTTGAAGTTTCACTAGCTTACGAAAGTGAAGATTATTTGCCACCTGGCATTAACTCTCCTGTAATTGCTCAGTACCAGATATCTGGTTTGACAGATGCAAGTGAGAAATACTCATCTCGGAATCTGTCATCCCCCATCAAGGCAAATATACATTTCTCTCTTAGTAGAAGTGGAATTCTTTCTCTGGATCGGGCAGATGCTGTTATTGAAATAACTGAGTGGGTGGAAGTTCCCAGGAAGAATTTGACCATAGACAATTCAACTATTTCGTCAAACATAACAGATGAATCTGGTGCTAGGAACAGTTCTGAGGAAAACAATGAAAGCATGCAAACTGATGGTGAGATTAATAAGACGTCCAATGTTAGTGAAGAGGAGCAAGCTGCTGCTGAACCTGCTACGGAGAGAAAGCTGAAAAAGCGGACCTTTAGGGTACCGTTAAAGATTGTTGAGAAGATAACTGGACCTGGGATGTCTCTATCAAAAGATTTTCTAGCTGAAGCTAAAAAAAAATTGGAAGCACTAGACAAAAGGGATGCAGAAAGAAAAAGAACAGCTGAATTAAAAAATAATTTAGAAGGATATATATATACCACTAAGGAAAAGATTGAAACTCTCGAGGATTTTGAAAAAGTTTCTACCAGTGAGGAGCGCCAGTCCTTTGTTGAGAAGCTTGATGAGGTGCAAGATTGGTTGTATACAGATGGTGAAGATGGCAATGCTACAGAGTTTCAAGACCGACTAGATCAGTTGAAAGCTGTTGGAGATCCAATTTTCTTCAGATTAAAAGAGCTCACAGCTCGACCAGTGGCAGTTGAGCATGCCCGTAAATATATTGATGAGCTGAAACAGATTGTACAAGGATGGAATGCAAACAAGTCTTGGCTTCCAAAAGAACGAGTAGATGAGGTGATAAATGATGCTGAAAAGTTAAAGAACTGGTTGAATGAGAAAGAGGCTGAGCAAAAGAAGTAA 2406 0.4377 MARLLPKLALIVTALAFLFSPSQSAVFSVDLGSESLKVAVVNLKPGQSPISIAINEMSKRKSPALVSFHDGNRLLGEEAAGLAARYPQKVYSQIRDLIGKPYASAKNFLDSMYLPFEVKEDSRGTVSFVVDENGTEYSPEELVAMVLSYATSLAEFHSKIPIKDAVISVPPYFGQAERKGLVQAAQLAGINVLSLINEHSGAALQYGIDKDFSNESRHVIFYDMGFSSTYAALVYFSSYKSKEYGKTVSVNQFQVKDVRWNPELGGQNMESRLLEYFANEFNAQVGNGIDVRRFPKAMAKLKKQVKRTKEILSANTAAPISVESLHGDVDFRSTITREKFEELCEDIWEKSLLPVKEVLEHSGLSMEQIYAVELIGGATRVPKLQAKLQEFLGRKELDRHLDADEATVLGAALHAANLSDGIKLNRKLGMIDGSLYGFVVELNGPDLLKDESSRQLLVPRMKKLPSKMFRSVNHNKDFEVSLAYESEDYLPPGINSPVIAQYQISGLTDASEKYSSRNLSSPIKANIHFSLSRSGILSLDRADAVIEITEWVEVPRKNLTIDNSTISSNITDESGARNSSEENNESMQTDGEINKTSNVSEEEQAAAEPATERKLKKRTFRVPLKIVEKITGPGMSLSKDFLAEAKKKLEALDKRDAERKRTAELKNNLEGYIYTTKEKIETLEDFEKVSTSEERQSFVEKLDEVQDWLYTDGEDGNATEFQDRLDQLKAVGDPIFFRLKELTARPVAVEHARKYIDELKQIVQGWNANKSWLPKERVDEVINDAEKLKNWLNEKEAEQKK. 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00967 801 FunFam Heat shock 70 kDa protein 4 265 350 - -
Seca5g00967 801 MobiDBLite consensus disorder prediction 566 604 - -
Seca5g00967 801 PRINTS 70kDa heat shock protein signature 25 38 - -
Seca5g00967 801 PRINTS 70kDa heat shock protein signature 369 385 - -
Seca5g00967 801 PRINTS 70kDa heat shock protein signature 401 421 - -
Seca5g00967 801 PRINTS 70kDa heat shock protein signature 165 185 - -
Seca5g00967 801 PRINTS 70kDa heat shock protein signature 57 69 - -
Seca5g00967 801 FunFam Heat shock 70 kDa protein 4 637 749 - -
Seca5g00967 801 SUPERFAMILY Actin-like ATPase domain 216 418 IPR043129 -
Seca5g00967 801 SUPERFAMILY Actin-like ATPase domain 26 210 IPR043129 -
Seca5g00967 801 ProSitePatterns Heat shock hsp70 proteins family signature 3. 372 386 IPR018181 -
Seca5g00967 801 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 426 571 IPR029047 -
Seca5g00967 801 Pfam Hsp70 protein 27 737 IPR013126 GO:0005524|GO:0140662
Seca5g00967 801 Gene3D Actin; Chain A, domain 4 265 350 - -
Seca5g00967 801 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 664 745 IPR029048 -
Seca5g00967 801 MobiDBLite consensus disorder prediction 566 614 - -
Seca5g00967 801 Gene3D - 637 749 IPR029048 -
Seca5g00967 801 Gene3D - 29 416 - -
Seca5g00967 801 PANTHER HSC70CB, ISOFORM G-RELATED 24 801 - -
Seca5g00967 801 CDD HYOU1-like_NBD 28 416 - -
Seca5g00967 801 Gene3D - 92 145 - -
Seca5g00967 801 FunFam Heat shock 70 kDa protein 17 426 572 - -
Seca5g00967 801 Coils Coil 778 798 - -
Seca5g00967 801 Gene3D - 211 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00967 Seca-Chr5 28165390 28178588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00967 22 543 Calmodulin-binding Proteins AT3G12580 28.733 5.17e-65 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00967 K09486 - gmx:100786898 1352.42