Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00951 ATGTCTCCTTTTGTGAGAAGTGTTCCCTTACTTTGGTTTCTTATAATATTGCTTTTAGCCAGCGATATTGCTCTTGGAAAAACACGTGTGCAGGTCGTAAATCATTTGATAGGAAATTTGGACTTAACCATTCACTGCAAATCTAAGGATGATGATCTTGGAGTCCAACTTATCCATCCTAGTAAGTCGTGGGAATTTAGTTTTAACCCTAATTTTTTCTTTTGGACCACACAATTCTATTGTCTCTTTCAATGGAAAGATTATGCTGGAGTCCAACAGAAATGGTTTGATATATACATAGGAAAAAGGGATAATGATTGCTCAATCTGTACTTGGTATATAAGCCAAGATAAACTATGTAGGAACATTTCAAAAAAGGTCTCTAAATGCTTTGAATGGAATAACTAA 408 0.3456 MSPFVRSVPLLWFLIILLLASDIALGKTRVQVVNHLIGNLDLTIHCKSKDDDLGVQLIHPSKSWEFSFNPNFFFWTTQFYCLFQWKDYAGVQQKWFDIYIGKRDNDCSICTWYISQDKLCRNISKKVSKCFEWNN. 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00951 135 PANTHER - 26 123 IPR010264 -
Seca5g00951 135 Pfam Plant self-incompatibility protein S1 29 133 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00951 Seca-Chr5 27489067 27489474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00951 27 135 Carbohydrate Esterase AT3G16970 37.069 3.78e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00951 - - tpra:123922325 102.064