Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00940 ATGGATCACAGATTGAGGGTAGAGCATCAAAGGACGGTGGCCTTGGTGTGGAGAAACTCAACATTCGATGCGAGATCTGTGCGACGAAATCGCGGTTGGATGTGGTCGACGATGGAGTTTGCTGACGATGACGGTGGCTGGAGAAGGGTGATTGCGGCCATTGGAACTCGCCTCCGTATAGCCATTCAAGTTCTTGCTATCGAAGTGGCCGATCCGCAGAGACCGATTTGCATAATAGTGGTCGACGATTCTCCGCACAGAGGGGGATTCGCACTGGTGGATTGGCCAAGGAGAGTGGTATTGAAGCGGTCGAACACAAAAGAGGAGGCAAACAGTTGTGTCCCAACAGAGGAAGATTTAGGGATCAGAGGAGGCAGGGCACAGGTAAAGGACGACACAGACGGAACGCACTCCTCTCGGTGGAACACTAGAGATCAATTGCTCCAGGGAAATCAAAATTTAGAGTGTAATTGGACCTTGCACATCATTGGAAAAGGGCCTTCTGTTGTTGCTACTGTGATAGGAGAGGGGAACACAACAGCTTGGAAAATGTGTGGCCTTGACAACAGTACATGCTTGACTGTGATGTTTGATCTTTCATCAAGTGATCATTCAAACACTCCAGCTGTTGTGGGAAAGGAATTGATTTGCAAGACTGATTCAAGTTTTGAGATTTCGGGCACTAAGGGTTACAATCTGCATGTCATAGGGAGATAG 717 0.4854 MDHRLRVEHQRTVALVWRNSTFDARSVRRNRGWMWSTMEFADDDGGWRRVIAAIGTRLRIAIQVLAIEVADPQRPICIIVVDDSPHRGGFALVDWPRRVVLKRSNTKEEANSCVPTEEDLGIRGGRAQVKDDTDGTHSSRWNTRDQLLQGNQNLECNWTLHIIGKGPSVVATVIGEGNTTAWKMCGLDNSTCLTVMFDLSSSDHSNTPAVVGKELICKTDSSFEISGTKGYNLHVIGR. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00940 238 Gene3D - 158 231 - -
Seca5g00940 238 SUPERFAMILY beta-sandwich domain of Sec23/24 165 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00940 Seca-Chr5 27123362 27125760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00940 203 238 Subtilisin-like Serine Gene Family AT5G19660 63.889 2.96e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00940 K14006 - gmx:100813940 90.8929