Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00938 ATGTTTCCCTCAATGATTGCAAGAGTTGTCAACCTTGATGTTATATCTAATGGCATGGGTGGAACCAGAAATGGTGCTATACAAGTGATTGGTAATGATGCTGCTAATGGACAACCATTCATGAGCTGTAGGAGGCTTCCTTCAGGTTGTATTGTGCAGGATATGCCCAATGGTTACTCCAAGCGTGATGCAGGTCAATGCATATATGATCGACTAAAGATGTTCACAACTTTTCCATCTCCACGACCTTATGTGGTCTGGAAAACCAATGCTAGAATTCTTACTTCTTCAAATCAAGATGCAGGAAACTCCCTTAAGAAGATAAGAAACAAAGCAATTCTGCAGAAGGAACCTGGTGGAATTATTCCTGCAGAAGATGCAGAATCCTTCTTAGATAGCTTAAATCATTTCTTTGGCAGCAGCTGA 426 0.4085 MFPSMIARVVNLDVISNGMGGTRNGAIQVIGNDAANGQPFMSCRRLPSGCIVQDMPNGYSKRDAGQCIYDRLKMFTTFPSPRPYVVWKTNARILTSSNQDAGNSLKKIRNKAILQKEPGGIIPAEDAESFLDSLNHFFGSS. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00938 141 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 39 61 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00938 Seca-Chr5 27068666 27070999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00938 1 61 Homeobox Transcription Factor Family AT3G61150 36.458 4.14e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00938 K09338 - gmx:100794400 99.3673