Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00933 ATGGATCCTCAAACTAGGAAGAAGGTCTGCTATGTCCAGTTTCCTCAGAGAGTTGATGGTATTGATACTCATGATCATTATGCCAACAGGAACACAATTTTCTTTGATATTAACATAAAGGGTCTAGATGGTATTCAGGGTCCTGTATATGTGGGGACAAAATGTGTTTTTAGGAGGCAAGATTTGTATGGTTATAATCCTCCTAGGAGGCAAGATATGTTTCTCACACACACACACACCCATATGACAAAAATTACATATGGAAAATGTGTTGTATAA 279 0.3728 MDPQTRKKVCYVQFPQRVDGIDTHDHYANRNTIFFDINIKGLDGIQGPVYVGTKCVFRRQDLYGYNPPRRQDMFLTHTHTHMTKITYGKCVV. 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00933 92 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 72 - -
Seca5g00933 92 Pfam Cellulose synthase 1 74 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00933 Seca-Chr5 26758969 26759367 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00933 1 69 Cell Wall Biosynthesis AT5G17420 82.609 1.74e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00933 K10999 - gmx:100799375 137.117