Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00924 ATGGAAGACATATGGTTGGGTTTACTAATCATTCTGATGACCAGTTTAGTTGTGCAAGCACAGCTGAAAACTGGTTTTTACTCTTCTTCATGCCCAACTGCAGAGGCCACAGTAAGGTCCACTGTTGAATCCTATTTCAATAAAGATCCCACCATTGCTCCTGGCCTGCTCAGGCTTCATTTTCATGATTGCTTTGTTCAGGGTTGTGATGGTTCAGTTCTGATTGCTGGTTCTTCTGCTGAGAGGAATGCATTACCAAACCTTGGACTAAGAGGTTTTGAAGTGATTGAAGATGCAAAATCACAACTTGAGACTATATGCCCTGGTGTTGTCTCATGTGCTGACATACTAGCATTAGCAGCACGTGATGCTGTTGACCTGAGTGATGGTCCAAGTTGGTCAGTCCCCACTGGAAGAAGAGATGGGAGGATTTCTTTATCATCTCAAGCCTCAAATTTGCCTTCTCCACTAGACCCTGTTTCTGTCCAAAGGCAAAAATTTGCTGCCAAAGGCCTAGATGACCATGACCTTGTCACACTAGTTGGTATGCTTTTTTTTTTTTTTTTTCACAATACTTCATGTCTATGTGAATCATATAATTATGCTATTAGTATATGA 618 0.4142 MEDIWLGLLIILMTSLVVQAQLKTGFYSSSCPTAEATVRSTVESYFNKDPTIAPGLLRLHFHDCFVQGCDGSVLIAGSSAERNALPNLGLRGFEVIEDAKSQLETICPGVVSCADILALAARDAVDLSDGPSWSVPTGRRDGRISLSSQASNLPSPLDPVSVQRQKFAAKGLDDHDLVTLVGMLFFFFFHNTSCLCESYNYAISI. 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00924 205 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00924 205 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00924 205 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00924 205 FunFam Peroxidase 25 166 - -
Seca5g00924 205 Gene3D Peroxidase, domain 2 154 183 - -
Seca5g00924 205 PANTHER PEROXIDASE 25-RELATED 14 183 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00924 205 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Seca5g00924 205 SUPERFAMILY Heme-dependent peroxidases 21 195 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g00924 205 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00924 205 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00924 205 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00924 205 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00924 205 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g00924 205 ProSiteProfiles Plant heme peroxidase family profile. 21 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00924 205 Pfam Peroxidase 38 183 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g00924 205 Gene3D - 25 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00924 Seca-Chr5 26439159 26440976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00924 4 204 Peroxidase AT2G41480 66.667 1.32e-95 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00924 K00430 - gmx:100806700 322.783