Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00908 ATGGTTTTTGTTTTGAAAATTGTTTTATATCTCTCTATGCTAATAACTATACTAGTTACTTTGCAGTTCAATGGTGGTAACGCAGGGATACTACCTGGCAAAGTAACTGTTGAAATAACCAATAATTTAAGTGATTATCAGTTGGGTGTTCATTGCAAAGACAAGAATCATGATCTTGGCTTTCAAGTTCTGCCCATCGGAGGAAGCTACAACTTCAAAGTTTCTCCTAATCTTTTCCTAAATAATACGTTGTACTTTTGCAACTTTAACTGGATAACAGAAGCACACTGGTTTAATATTTATGATCAAGAACGAGATGATTGTGATGACACATGTCATTGGGATATAGTGGCAACAGGACCATGTAAGGTTAAGGAGGACTCTCTGGATTGCTTTCACTGGAATAACGCCATAAAGGCAGCTTGA 426 0.3662 MVFVLKIVLYLSMLITILVTLQFNGGNAGILPGKVTVEITNNLSDYQLGVHCKDKNHDLGFQVLPIGGSYNFKVSPNLFLNNTLYFCNFNWITEAHWFNIYDQERDDCDDTCHWDIVATGPCKVKEDSLDCFHWNNAIKAA. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00908 141 PANTHER - 33 125 IPR010264 -
Seca5g00908 141 Pfam Plant self-incompatibility protein S1 36 128 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00908 Seca-Chr5 25880007 25880432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00908 34 136 Carbohydrate Esterase AT3G16970 40.708 8.52e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00908 - - cam:101507265 138.272