Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00894 ATGGCTGCTTTGTTGAAGAGTCTCTCAAGATCGCCCCTTTCAAATGCATTCGCTAAGGGCTTCGTTTTCCAATCTAAATCTTCTCACTATCACAGATACACTATCCGCCCACCCGTCTTCGCAATCGCTGTCATTTCCGGTGGAATCACCTACTTTAGCTACCATTCCTCACCCAACCCGGCTCATGCAGAACACGTGAATGGAGAGAAAAGTAGAGATATCGCACTCAATCCTGATAAATGGATCAAATTTAAGTTGCAAGACACTGCCAGGGTCAGTCACAATGCCCAGTTATTCAGGTTTTCATTTGATCCCACTAAGAATTTGGGTTTAGATGTTGCATCTTGCATTATTACGAGGGCACCATTGGGACAAGATGCTGAAGGAAAACCAAAATATGTGATACGTCCGTACACTCCTATATCAGATCCAGAATCTAAGGGTTACTTTGATTTGTTAATCAAGGTGTATCCTGAAGGAAAAATGAGCCAGCATTTTGCAAGCTTAAAGCCTGGTGATGTTATTGAAGTAAAAGGGCCCATTGAAAAGCTCAGATATACTCCTAATATGAAGAAACATATTGGCATGATTGCTGGTGGCACAGGAATTACTCCAATGCTTCAGGTAATTGAAGCTATACTGAAGAATCCTGATGACAAAACTCAGATATCATTGCTTTACGCTAATGTCTCCCCAGATGACATACTGCTTAAACAGAAGCTTGACATTCTTGCAGCTAGCCATCCAAACTTAAAGATATTTTACATTGTAGATAATCCAACGAAAAGTTGGAGAGGAGGTGCAGGTTACATATCAGAGGATATGGTTGTGAAAGGCTTACCCAGTCCTAGTGACGATACTCTTGTGCTTGTTTGTGGCCCCCCTGGGATGATGGAACATATATCTGGGGACAAGGCTAAAGACCGGTCACAAGGAGAGCTTACTGGCTTACTCAAAGAGCTTGGGTACACTGAGCAAATGGTTTACAAATTTTAG 996 0.4217 MAALLKSLSRSPLSNAFAKGFVFQSKSSHYHRYTIRPPVFAIAVISGGITYFSYHSSPNPAHAEHVNGEKSRDIALNPDKWIKFKLQDTARVSHNAQLFRFSFDPTKNLGLDVASCIITRAPLGQDAEGKPKYVIRPYTPISDPESKGYFDLLIKVYPEGKMSQHFASLKPGDVIEVKGPIEKLRYTPNMKKHIGMIAGGTGITPMLQVIEAILKNPDDKTQISLLYANVSPDDILLKQKLDILAASHPNLKIFYIVDNPTKSWRGGAGYISEDMVVKGLPSPSDDTLVLVCGPPGMMEHISGDKAKDRSQGELTGLLKELGYTEQMVYKF. 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00894 331 Gene3D - 178 331 IPR039261 -
Seca5g00894 331 FunFam NADH-cytochrome b5 reductase 74 177 - -
Seca5g00894 331 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 79 187 IPR017927 GO:0016491
Seca5g00894 331 CDD cyt_b5_reduct_like 84 331 - -
Seca5g00894 331 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 195 214 IPR001709 GO:0016491
Seca5g00894 331 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 288 296 IPR001709 GO:0016491
Seca5g00894 331 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 233 244 IPR001709 GO:0016491
Seca5g00894 331 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 136 143 IPR001709 GO:0016491
Seca5g00894 331 Gene3D Translation factors 74 177 - -
Seca5g00894 331 PRINTS Cytochrome B5 reductase signature 288 296 - -
Seca5g00894 331 PRINTS Cytochrome B5 reductase signature 136 143 - -
Seca5g00894 331 PRINTS Cytochrome B5 reductase signature 172 186 - -
Seca5g00894 331 PRINTS Cytochrome B5 reductase signature 233 244 - -
Seca5g00894 331 PRINTS Cytochrome B5 reductase signature 195 214 - -
Seca5g00894 331 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 173 329 IPR039261 -
Seca5g00894 331 Pfam Oxidoreductase FAD-binding domain 84 186 IPR008333 -
Seca5g00894 331 PANTHER NADH-CYTOCHROME B5 REDUCTASE 53 331 IPR001834 GO:0016491
Seca5g00894 331 FunFam NADH-cytochrome b5 reductase 178 331 - -
Seca5g00894 331 Pfam Oxidoreductase NAD-binding domain 196 302 IPR001433 GO:0016491
Seca5g00894 331 SUPERFAMILY Riboflavin synthase domain-like 73 189 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00894 Seca-Chr5 25185919 25194020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00894 66 331 NADPH P450 reductases AT5G17770 39.925 1.41e-66 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00894 K00326 - cave:132165401 525.783