Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00884 ATGGCGACGAGGGTGCGAAGGCTGCGCGTGACGGAGGCCGCTCATGACGAAGACTGTCCACGACAGTCGCACTTGATTCGCGACGGCGAAGGGCCAGAGGACAAGCTACTCTCTCAAATTGTATTTCTGGTTCTGTTTCTGGTGGATTTTAATATGGTTTTTCTCCTCTATTTTCTCTCTGGATACGCTGTTAGGGAAAGGATTATTCGTGCTTTCTTGGTTGAAGAGCAAAAGATAGTTACAAAGGTCTTGAAGATCCAGAATGGAAAGGAAAATCAGGCTTAA 285 0.4667 MATRVRRLRVTEAAHDEDCPRQSHLIRDGEGPEDKLLSQIVFLVLFLVDFNMVFLLYFLSGYAVRERIIRAFLVEEQKIVTKVLKIQNGKENQA. 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00884 94 Gene3D - 58 94 - -
Seca5g00884 94 PANTHER 60S RIBOSOMAL PROTEIN L34 59 92 IPR008195 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00884 Seca-Chr5 24764755 24767526 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00884 59 94 Cytoplasmic Ribosomal Protein Gene Family AT3G28900 77.778 6.31e-12 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00884 K02915 - pop:7484340 58.151