Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g00837 ATGGGAACCTCTGCAAACGCCGCCGCCGCCGGTGGCCGTAGCAACGCCCTCCACAAAGACGTTGACTATGCTCAATACTTCTGCACCTACGCTTTCCTTTACCACCAGAAGGAGATGCTCTCTGATCGGGTTCGCATGGACGCTTACTTCAACGCCATTTTTGAGAACAAACATCACTTCAACGGCAAGACTGTTTTGGATGTGGGAACTGGAAGTGGCATTCTTGCTATATGGTCAGCACAAGCAGGTGCAAGGAAAGTGTATGCAGTGGAAGCTACCAAGATGTCAGAACACGCACGTGCACTTGTCAAAGCAAATAATCTTCAGCACGTGGTTGAAGTCATTGAGGGTTCAATGGAGGATGTTACCTTGCCAGAGAAAGTTGATGTCATCATCTCTGAGTGGATGGGTTATTTTCTTCTGCGTGAATCTATGTTTGATTCAGTTATATTTGCTCGTGACCACTGGCTCAAACCAACAGGAGTCATGTATCCTAGCCATGCTCGAATGTGGATGGCACCTATCAGGACTGGGATCGTAGATCACAAAATGGGTGATTACGAGTCTGCTATGGATGATTGGCACCACTTTGTCGATGAAACAAAGACCTACTATGGTGTTGATATGAGCACTTTAACGAAGCCCTTTTCAGAGGAGCAGAGGAAATACTATCTACAGGCAAGTTGTATACTTAGTACATCAATGTGGAACAACCTTCATCCTCATCAAGTCATAGGAACTGCTGCTGTAATAAAGGAAATTGACTGTTTAACTGCCACAGTGACTGACATAGAGAAAGTCAGGTCAAAGTTTTCTTTGTCAATAACCATCGAAAACATGAAGTTGTGTGGATTTGGAGGGTGGTTTGATGTGCATTTTAGGGGGAGAAACGAAGATCCAGCTGAACATGAGATTGAGTTAACTACTGCTCCCAGTGTAGATTTTGGTACACACTGGGGCCAACAGGTTTTTCTCTTGCACCCTCCTACACATGTGAGTAAAGGTGATAATTTAAGTGTTTCTTTCCTGATGAGCCGCTCAAAGGAAAACCATCGGTTGATGGAGGTTGAGCTTGGGTGTGAGATTCAACAGCATTCTGGCAAGCTTCTTGCACCTTTCAAAAATAAGTACTACATTGAATGA 1143 0.4453 MGTSANAAAAGGRSNALHKDVDYAQYFCTYAFLYHQKEMLSDRVRMDAYFNAIFENKHHFNGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMSEHARALVKANNLQHVVEVIEGSMEDVTLPEKVDVIISEWMGYFLLRESMFDSVIFARDHWLKPTGVMYPSHARMWMAPIRTGIVDHKMGDYESAMDDWHHFVDETKTYYGVDMSTLTKPFSEEQRKYYLQASCILSTSMWNNLHPHQVIGTAAVIKEIDCLTATVTDIEKVRSKFSLSITIENMKLCGFGGWFDVHFRGRNEDPAEHEIELTTAPSVDFGTHWGQQVFLLHPPTHVSKGDNLSVSFLMSRSKENHRLMEVELGCEIQQHSGKLLAPFKNKYYIE. 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g00837 380 CDD AdoMet_MTases 64 164 - -
Seca5g00837 380 Gene3D Vaccinia Virus protein VP39 20 165 IPR029063 -
Seca5g00837 380 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 20 357 IPR025799 GO:0016274|GO:0018216
Seca5g00837 380 Pfam Ribosomal protein L11 methyltransferase (PrmA) 61 133 - -
Seca5g00837 380 Gene3D - 167 380 - -
Seca5g00837 380 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 18 364 IPR025799 GO:0016274|GO:0018216
Seca5g00837 380 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 30 364 IPR029063 -
Seca5g00837 380 FunFam Protein arginine N-methyltransferase PRMT10 20 165 - -
Seca5g00837 380 FunFam Protein arginine N-methyltransferase PRMT10 167 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g00837 Seca-Chr5 22293631 22300297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g00837 25 339 C2H2 Transcription Factor Family AT3G12270 30.952 2.43e-40 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g00837 K11434 - gmx:100795134 682.174